Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1431 ATGAATCCTGTTTTTGTTCGCCGGAGTTTCAATGCTGCTGCTGGTTTCATCGTACCCGGTTCCATGCTGGACAATACTTTTGTCCTTGATTCCTTTGTCGCCGCCGCCAATAATACCGGTGGTCATCGTCGTCCTCGGAACAACAACAACAACAACAACAACATGGGGATGTTCTCTTCACCGGTAGCAATTGATTCCTTTGTCGCGGCACCCAATAATACGGGTGGTCATCGTCCCCGGAACAACAACAACAACAACATGAGGCCTGTAGCAACAACAAGGGACGTAGGTCCACCAAATCTTCATAATGGAAGAGACAGAATCAGAATGGTAGATGATACTATTCTTCTCTTTGATAATAATTCTTATTCTATCGCTAACAACACCACCATGGGGGGTCACAACAATGCTCTGCTTGATGATGTACCATTCTATCATTCTCCTCAACTTGATTTCATCAATCTTGATGAAATTGCAACAACAGATTTTTCAAAAACAGATGATCCATGCTCCATATGTCTTTGTGAATTGTCTACTGATTCAACGGCAGTTCAGATTCGCCGTTGCTCTCATATATTCCACAGCGACTGTATTCAAAAGTGGATCGGTGTGAGGAGAACATGCCCCCTTTGTAGAATCAACCTCCTTTAG 651 0.4363 MNPVFVRRSFNAAAGFIVPGSMLDNTFVLDSFVAAANNTGGHRRPRNNNNNNNNMGMFSSPVAIDSFVAAPNNTGGHRPRNNNNNNMRPVATTRDVGPPNLHNGRDRIRMVDDTILLFDNNSYSIANNTTMGGHNNALLDDVPFYHSPQLDFINLDEIATTDFSKTDDPCSICLCELSTDSTAVQIRRCSHIFHSDCIQKWIGVRRTCPLCRINLL* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1431 216 Pfam Ring finger domain 170 212 IPR001841 -
Tpr7g1431 216 SUPERFAMILY RING/U-box 163 215 - -
Tpr7g1431 216 MobiDBLite consensus disorder prediction 74 100 - -
Tpr7g1431 216 PANTHER RING ZINC FINGER PROTEIN-RELATED 147 215 - -
Tpr7g1431 216 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 147 215 - -
Tpr7g1431 216 SMART ring_2 170 211 IPR001841 -
Tpr7g1431 216 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 149 215 IPR013083 -
Tpr7g1431 216 MobiDBLite consensus disorder prediction 75 91 - -
Tpr7g1431 216 ProSiteProfiles Zinc finger RING-type profile. 170 212 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1431 Tpr-Chr7 15635773 15647287 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1431 133 216 C3H Transcription Factor Family AT2G18650 36.905 2.39e-12 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1431 - K19039 cam:101492064 70.0922