Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1425 ATGGAGGACTTAAACATGTGGCTTTCTTTCTATATGAATGAAAGTGACAACCATGATTTCCCCATCAGAAGGTTTTGTCCTGCAAGAATGGAGCAAGATCAAGGAGGAGATTGCCATGACCAAGAAACAGTACTTGATCATATTGAATTGTGTACTTTTGATACTAACACAACTCCTTGTTTATTAGCTTCTTCAGAAGTTGATGACTTTGTTGATAGTTTCATCAACATGGATCAGTATGAAGATCAAGAGTCTCAAGAGAATCATAATCATCATCAAAGTTTTTATCACTTTGTGGTGAATGAAGAAGATGATGATGTTGATGCATACTCCATTGGATATGTTCCAACCACAATGGAGGATGAAGAATTAGAGATATGTGATAATACCGCAATCACAATGGAGGAAGAAGAAGTTGAAATGAATGGCACTTTTGGTGCTATACCACAGGCACGAGCCAGTGTCGGTATGAACCAAGGCCTTGACTTGGTGCATACGTTGCTGGTTTGTGCTGAGGCCATAGGCTGTAGAGACAACCACCAGGCAAATTTGTTACTTGGGAAAATTTTGGCTATGGCAAATCCTTCAGGAGATTCATTGCAAAGAGTCTCTTACTGTTTTGCCAAAGGCTTGAAGTGTAGGTTATCACTTTATCCTCATAATAATGTATATTCAAATGGTGCACTCACAACAAGTGCTTCTAATGATGTTTCTTTGATCACTAGGGAAAATAAGTTGGAAGCTTTTCAACTTCTTTACCAAACAACACCCTACATTACTTTTGGTTTCATGGCTGCAAATGAAGCTATATGCCAAGGATCAAAAGGTAAAAGCTCAATACACATAATTGATTTAGGAATGGAGCATACTCTTCAATGGCCTTCCCTTATAAGGAACCTCGCTTCGAGGCCCGAGGGGCCTCCAAGGCTAAGGATAACAGGATTCAGTACGAACAAAGAAAACAATGCGAAACTTCACACTAGCATGAATTTTCTTGTGGAGGAAGCAATCTCATTAGGAATAGTCCTTGAATTTCACATAATATCAGAGCCGGCAACGCCTTCTTTTCTTACAATTGAGAACCTCAACTTGAGAGAAGGTGAATTGTTATTTGTTAATAGCATCTTAAAATTGCACAATTATGTGAAAGAAAGTAGAGGTTATCTAAAGGCAGTTCTTCAATCAATCAAGAAGCTAAGTCCAATTGCAGTGACAGTTATAGAGCAAGACACAAACCACAACGGACCTTTCTTTCTAGGGAGGTTTTTGGAATCACTTCACTATTACTCAGCAATATTTGATTCTCTTGAAGCATGTATGCCAAGAAATAGTCCTATTAGGATGAAAATAGAGAGAGCACATTTTGCAGAAGAAATTTGTAACATTGTTGCTTATGAAGGTCCTGATAGAATGGAGAGACATGAAAGAGTAGATCAATGGAGAAGACAATTAGGAAGAGCAGGATTTCATGTAATGCCACTCAAGTGTACAAGTCAAGCTAGAATGATGCTTTCTGTTTATGATTGTGAGGGATATACATTGTCATGTGAAAAGGGCTGTCTTTTACTTGGTTGGAAAGGAAGGCCTATTATGATGGCTTCTGCTTGGCAAGTGGCAAGTTTCTCATAA 1629 0.3849 MEDLNMWLSFYMNESDNHDFPIRRFCPARMEQDQGGDCHDQETVLDHIELCTFDTNTTPCLLASSEVDDFVDSFINMDQYEDQESQENHNHHQSFYHFVVNEEDDDVDAYSIGYVPTTMEDEELEICDNTAITMEEEEVEMNGTFGAIPQARASVGMNQGLDLVHTLLVCAEAIGCRDNHQANLLLGKILAMANPSGDSLQRVSYCFAKGLKCRLSLYPHNNVYSNGALTTSASNDVSLITRENKLEAFQLLYQTTPYITFGFMAANEAICQGSKGKSSIHIIDLGMEHTLQWPSLIRNLASRPEGPPRLRITGFSTNKENNAKLHTSMNFLVEEAISLGIVLEFHIISEPATPSFLTIENLNLREGELLFVNSILKLHNYVKESRGYLKAVLQSIKKLSPIAVTVIEQDTNHNGPFFLGRFLESLHYYSAIFDSLEACMPRNSPIRMKIERAHFAEEICNIVAYEGPDRMERHERVDQWRRQLGRAGFHVMPLKCTSQARMMLSVYDCEGYTLSCEKGCLLLGWKGRPIMMASAWQVASFS* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1425 542 ProSiteProfiles GRAS family profile. 154 537 IPR005202 -
Tpr7g1425 542 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 3 539 IPR005202 -
Tpr7g1425 542 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 3 539 - -
Tpr7g1425 542 Pfam GRAS domain family 163 537 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1425 Tpr-Chr7 15562794 15564981 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1425 160 538 GRAS Transcription Factor Family AT1G66350 36.623 1.74e-72 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Tpr7g1425 GRAS 7.5e-107 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1425 - - gmx:100814931 773.081