Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1418 ATGAAGAAAATCAATCTATTATTAAGAAAGTGCAAGAGCTTGTCAAGCAAATTAGGAAGATCATCATCTTATAGTAGCTTAAGGTCAACCAGAGAAGATTTATATGAAATTCAACAAGATGATCAAAATTGTGAAACTATATTTGTTGGTAGCACAAGAAAACGGTATGTTATAAGTTCAAAGTATTTGAATCATCCTCTTCTTAATGCTTTGATCAACAAGAATAAGAAAGAGGGTAGTGAATATGATAATAATGTTTTGATTGTTAATTGTGAGGTTGTTCTTTTTGATCATTTATTATGGATGCTAGAAAATGCTGATCCTATGTTTAGTTCTGAGTCTTTAGATGAATTGGCTGAACTTTATGTGTTTTAA 375 0.296 MKKINLLLRKCKSLSSKLGRSSSYSSLRSTREDLYEIQQDDQNCETIFVGSTRKRYVISSKYLNHPLLNALINKNKKEGSEYDNNVLIVNCEVVLFDHLLWMLENADPMFSSESLDELAELYVF* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1418 124 Pfam Auxin responsive protein 32 103 IPR003676 GO:0009733
Tpr7g1418 124 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 3 124 IPR003676 GO:0009733
Tpr7g1418 124 PANTHER EXPRESSED PROTEIN 3 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1418 Tpr-Chr7 15434146 15434784 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1418 46 105 Calmodulin-binding Proteins AT5G20810 33.333 9.01e-07 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1418 - - gmx:100500162 157.918