Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1408 ATGGAAAGAATGTTCCCTGCAAAAAAGCCCTCAACAATGATGAATTCTCATGATAGATCCATGTGTGTTCAAGGTGATTCAGGCCTTGTCCTCACTACCGATCCAAAACCACGGCTTCGATGGACAGTCGAACTCCATGAACGCTTCGTCGATGCTGTTGCTCAACTTGGAGGGCCTGATAAAGCTACTCCTAAAACAATCATGAGGGTTATGGGTGTGAAGGGTCTTACTCTTTACCACCTCAAGAGTCATCTTCAGAAATTTAGACTTGGAAAGCAACCCCACAAGGAATTCAATGAGCAATCTATTAAGGATGGTATGAGAGTTTCGGCTTTTGAACTGCAACGAAATAGTGGCAACTCATCTTCTATGACTGGCCGCAACATGAATGAGATGCAAATGGAGGTGCATAGAAGATTGCATGAACAACTAGAGGTTCAAAAGCACCTTCAATTGAGGATTGAGGCTCAAGGAAAATACATGCAAAACATATTGGAGAAAGCATATAACACACTTGCAGGAGAAAACATGGCAGCTGCATCAGCTACAAATTTCAAGGGTATTGGAACTCAAGGAATCCCTAACATGAAAGATTTTGTTTCTCCTCTTAATAATTTTCCTCATTTTCAAGACCTTAACATTTGTGGTAGTGATGATGAACAGCTTGAGAGGCCAACCATTGATGGATTTATGCCAAATATTAGTAATGAAAATTTGTTTGTTGAAAGGAAAATAACTAATAACCCTTTTAATGGAAGTGGAAAAGGTCCATTAATTTGGAATGATAATAATGATCTTAGGCTTCATGATTTGGGAACAACTTCATCATGCATTAGTCCTCAAGATGTTCCTAATTTCAAAGGTGATGATGACTCATTGGATAGAGGTGATATTGAAAGTGATCCTATTGTTGAGATTCATTATGATACAAAGTTGAGTGAAAAGAAATTTGATGCATCTATGAAGCTTGGAATAACAACACCTATGATCAATGCTGTGGCAGCTGGTAGAAGCTCATCACCATTTTCTTGA 1032 0.3876 MERMFPAKKPSTMMNSHDRSMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNEQSIKDGMRVSAFELQRNSGNSSSMTGRNMNEMQMEVHRRLHEQLEVQKHLQLRIEAQGKYMQNILEKAYNTLAGENMAAASATNFKGIGTQGIPNMKDFVSPLNNFPHFQDLNICGSDDEQLERPTIDGFMPNISNENLFVERKITNNPFNGSGKGPLIWNDNNDLRLHDLGTTSSCISPQDVPNFKGDDDSLDRGDIESDPIVEIHYDTKLSEKKFDASMKLGITTPMINAVAAGRSSSPFS* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1408 343 Pfam MYB-CC type transfactor, LHEQLE motif 132 170 IPR025756 -
Tpr7g1408 343 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 33 93 IPR017930 -
Tpr7g1408 343 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 4 277 IPR044848 GO:0003700
Tpr7g1408 343 SUPERFAMILY Homeodomain-like 35 91 IPR009057 -
Tpr7g1408 343 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 36 91 IPR006447 GO:0003677
Tpr7g1408 343 Pfam Myb-like DNA-binding domain 39 87 IPR001005 -
Tpr7g1408 343 Gene3D - 35 93 - -
Tpr7g1408 343 PANTHER MYB FAMILY TRANSCRIPTION FACTOR APL 4 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1408 Tpr-Chr7 15191357 15194234 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1408 4 293 G2-like Transcription Factor Family AT1G79430 58.842 1.35e-106 314
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Tpr7g1408 Myb_DNA-binding 4.6e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1408 - - gmx:100796268 445.662