Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1405 ATGGTTACTCTCAAGGGAAAATCAAGAGCGGAATCAACACGAGCTGCAGTAGGTGGCCAATCGCGTCCAACTGTGGGTGGTAAGAATTTCAAGGTTTTTTCGGAAAATGACCGGATTAAAGTTGATGATGGGACCATGACATCTGCAAGAGAAGTCGGTGCAGCTTCAAGAAAGAGTGCTATAGAAGCTAACAAAGGGGTTATTTCAAATGGTGTCAATAATTCAAAGGGTGACTTCAAAAGCATGGAGAAAAGTAAAGGAACTTATGGCACTTCTGCAAATATGAACGCGAGAAAGGCATTGGCTGATGTTACCAATGCTCAAGGAAACTTTACGACAGCTGCTAAGCGTAATATCTCCAAAATAAAGGTTTCAGGAGGTTCAACTACTAAAACAGTGGGCATCTCTCTGAGGAAATCCAGCACGGTAAGAGAGCAACGAAATACTAGTCGTGGTGGAGTTCAATTAGATGCTCCCAATAGAGGTTTAAGGGTTTCTTTAGGTGATCAGAAGAATAGTTCAAATTCAAATGGAGGTCAGTCAGTTGCCACAAAGGATAGGTTTGCAAGGAAGCCTATGTTACCTACAACAACTACAAGGAAGTCTCTGCCAGTTCCTTTAGGCACAGGTTTAAGGGTTTCTTTAGGTGATCAGAAGAATAGTTCAAATGGACGTCAATCAGTTGCTACAAAGGATAGGTTTGCAAAGAAGCCTATGTTGCCAACAACAAGCATTTCAAGGAAGTCGCTGCCAGTTCCAAGGAGGGTAAACAGGGTTGAGAGTAATAACACAAAGGAAAATGCTGGAAGTTCTGAAAGAGCTAATGGCCAAACTGGTCTTCCAAGTAAGCTGACAACAGACAGAAGAGTTAGTTCCCAACTAATTAATACAAGGAGCCATCTATTGAAGACTCGAGTTAGTGATGGCTTTATTCAAATGGTTACAAGTAATGCTTACCAAGCATCCTCAAGGAAGTCCGCCAAGCCTATTGTTAAGACCACACTCAAGGCTTCTACATCTCAGAGGACTCTAAAATCTAAATCCATATCAGGCGAGAACATATCAAAACCAACCACCGCAATAGCATCTAAGGATGAGGCAAAAGTTTCTTCATCTCTTCCCGAGAATAGTTCCGTGGTTGTTTCCGATGACGCAAATCAAACCCATCTTCCATCTGAAGGGGAGAGCAGTCTGAAAACAGATTTATCAGAGTTGATTCCAAGAAAAAGATCCAGCCGTCGGAAATCTTATACAACTTCATTAATGGAAAAATCTAAGATTCTCAAGGAAAATGGTGAAGTTAGGGCGCAGGATAACCTACCAAATATAGATGATGAATGTAATCATCTAGAAGTTTCTGAATACATTGATGATATATATCAGTACTATTGGGATACCGAGGCACATAGTCAAGCTCTATCAAATTACATGTCAATTCAGACAGAGATTACTCCTCACATGCGGGGAGTATTAGTCAACTGGCTAATTGAGGTACACTTCAAATATGATTTGATGCCTGAGACCCTATATCTGACAGTGACACTGTTGGATCAATATCTTTCCCAAGTGAACATAAAAACAAGTGATATGCAGTTAGTTGGTCTTACAGCACTTTTGCTGGCTTCAAAGTATGAGGACTTTTGGCACCCAAGGGTAAAAGATTTGATTAGCATCTCAGCCGAGTCGTATACTAGAGATCAGATGCTTGGAATGGAAAAGCTTATTCTTAGAAAATTGAAGTTCCGTCTTAATGCTCCCACTCCTTACGTTTTTATGGTTAGGTTTCTCAAGGCTGCACAATCAGATATGAAGCTTGAACACATGTCATTCTTTCTCATTGACCTATGCTTAGTTGAATATGAAGCTTTAGCGTTCAAGCCTTCATTACTATGTGCATCAGCTCTCTATGTTGCACGTTGTACCTTGAAAGTAACCCCAACATGGACACCACTACTTCAGAAGCATGCGCGCTACGAAGTTTCACAGATCAGGGATTGTGCGGATATGATATTGAAATTCCATAAAGCTGCTGGGAAGGGAAAGTTAAAGGTCGCTTATGAAAAATATTTCAGAAAGGAACTCAGTGGGGTCGCTGCAGTGAAGCCGTTGGATAGACTTCCCCATTGA 2127 0.4109 MVTLKGKSRAESTRAAVGGQSRPTVGGKNFKVFSENDRIKVDDGTMTSAREVGAASRKSAIEANKGVISNGVNNSKGDFKSMEKSKGTYGTSANMNARKALADVTNAQGNFTTAAKRNISKIKVSGGSTTKTVGISLRKSSTVREQRNTSRGGVQLDAPNRGLRVSLGDQKNSSNSNGGQSVATKDRFARKPMLPTTTTRKSLPVPLGTGLRVSLGDQKNSSNGRQSVATKDRFAKKPMLPTTSISRKSLPVPRRVNRVESNNTKENAGSSERANGQTGLPSKLTTDRRVSSQLINTRSHLLKTRVSDGFIQMVTSNAYQASSRKSAKPIVKTTLKASTSQRTLKSKSISGENISKPTTAIASKDEAKVSSSLPENSSVVVSDDANQTHLPSEGESSLKTDLSELIPRKRSSRRKSYTTSLMEKSKILKENGEVRAQDNLPNIDDECNHLEVSEYIDDIYQYYWDTEAHSQALSNYMSIQTEITPHMRGVLVNWLIEVHFKYDLMPETLYLTVTLLDQYLSQVNIKTSDMQLVGLTALLLASKYEDFWHPRVKDLISISAESYTRDQMLGMEKLILRKLKFRLNAPTPYVFMVRFLKAAQSDMKLEHMSFFLIDLCLVEYEALAFKPSLLCASALYVARCTLKVTPTWTPLLQKHARYEVSQIRDCADMILKFHKAAGKGKLKVAYEKYFRKELSGVAAVKPLDRLPH* 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1405 708 SMART Cyclin_C_2 586 703 IPR004367 -
Tpr7g1405 708 MobiDBLite consensus disorder prediction 166 183 - -
Tpr7g1405 708 SUPERFAMILY Cyclin-like 586 705 IPR036915 -
Tpr7g1405 708 MobiDBLite consensus disorder prediction 133 155 - -
Tpr7g1405 708 SUPERFAMILY Cyclin-like 448 584 IPR036915 -
Tpr7g1405 708 PANTHER CYCLIN-B3-1-RELATED 205 705 - -
Tpr7g1405 708 Gene3D - 579 706 - -
Tpr7g1405 708 CDD CYCLIN 487 576 IPR013763 -
Tpr7g1405 708 Pfam Cyclin, N-terminal domain 458 584 IPR006671 -
Tpr7g1405 708 SMART cyclin_7 493 577 IPR013763 -
Tpr7g1405 708 SMART cyclin_7 590 672 IPR013763 -
Tpr7g1405 708 CDD CYCLIN 584 671 IPR013763 -
Tpr7g1405 708 Gene3D - 472 578 - -
Tpr7g1405 708 Pfam Cyclin, C-terminal domain 586 700 IPR004367 -
Tpr7g1405 708 PANTHER CYCLINS 205 705 IPR039361 -
Tpr7g1405 708 MobiDBLite consensus disorder prediction 133 289 - -
Tpr7g1405 708 MobiDBLite consensus disorder prediction 214 229 - -
Tpr7g1405 708 MobiDBLite consensus disorder prediction 242 289 - -
Tpr7g1405 708 MobiDBLite consensus disorder prediction 363 398 - -
Tpr7g1405 708 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1405 Tpr-Chr7 15115461 15124889 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1405 25 707 Core Cell Cycle Gene Families AT1G16330 42.174 4.39e-159 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1405 K21777 - gmx:100808850 830.476