Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1385 ATGAAGAAAATCAATCTATTATTAAGAAAGTGCAAGAGTTTGTCAAGCAAATTAGGAAGATCATCATCTTATAGTAGCTTAAGGTCAAAATCAACTAGAGAAGATTTATATGAAATTCAACAAGATGATCAAAATTGTGAAACTATATTTGTTGGTAGCACAAGAAAACGGTATGTTATAAGTTCAAAGTATTTGAATCATCCTCTTCTTAATGCTTTGATCAACAAGAATAAGCAAGAGGGTAGTGAATATGATAATAATGTTTTGATTGTTAATTGTGAGGTTGTTCTTTTTGATCATTTATTATGGATGCTAGAAAATGCTGATCCTATGTTTAGTTCTGAGTCTTTAGATGAATTGGCTGAACTTTATGTGTTTTAA 381 0.2913 MKKINLLLRKCKSLSSKLGRSSSYSSLRSKSTREDLYEIQQDDQNCETIFVGSTRKRYVISSKYLNHPLLNALINKNKQEGSEYDNNVLIVNCEVVLFDHLLWMLENADPMFSSESLDELAELYVF* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1385 126 Pfam Auxin responsive protein 28 105 IPR003676 GO:0009733
Tpr7g1385 126 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 3 126 IPR003676 GO:0009733
Tpr7g1385 126 PANTHER EXPRESSED PROTEIN 3 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1385 Tpr-Chr7 14828525 14829241 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1385 48 107 Calmodulin-binding Proteins AT5G20810 33.333 5.45e-07 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1385 - - gmx:100500162 166.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g1385 7 14828525 14829241 Tpr7g1385 7 14828525 14829241 ECH