Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1360 ATGAATTTACTCCGCAAGCTCACCCGAGCCATCAACGCGGCGACACAGCGGCGGAATAACACTTCCCGCCGATCTGACTCAACAAGAGAGCCGCTGGCTGAGTCTTCAGAGAACAATCACGTGCCTGAAGGTCATGTGCCAGTTTACGTGGGAGAGGAGATGGTCCGGTTTGTTGTGCATGCTGAGGTGCTGAACCATCCGGTTTTGGTGAACCTGCTGAACATGTCGGCTCAAGAATATGGTTATCAAGGTGTGCTTCGAATTCCTTGCCGTGTCGTTGTGTTTGAGCGAATTCTTGAAGCGATTCGACTCGGTCGTAAGTCGGGTGCAATTCATGAACTCCTCCTCTCTGATGAGTGA 360 0.5167 MNLLRKLTRAINAATQRRNNTSRRSDSTREPLAESSENNHVPEGHVPVYVGEEMVRFVVHAEVLNHPVLVNLLNMSAQEYGYQGVLRIPCRVVVFERILEAIRLGRKSGAIHELLLSDE* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1360 119 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR72 9 116 - -
Tpr7g1360 119 Pfam Auxin responsive protein 12 101 IPR003676 GO:0009733
Tpr7g1360 119 MobiDBLite consensus disorder prediction 12 44 - -
Tpr7g1360 119 Coils Coil 4 24 - -
Tpr7g1360 119 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 9 116 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1360 Tpr-Chr7 14442161 14442520 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1360 5 102 Calmodulin-binding Proteins AT3G43120 35.644 2.88e-14 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1360 K14488 - ccav:112507268 118.242