Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1357 ATGACTTGTTTTGCTTTCTTATTTGGTAAGAAAGTGTCTTCTGATGTAAGACGAGATCCTGTAATCGATGAAGGACTTTCTGGCATTCGAATAAAAGTTTATACTTACAAAGAACTAAAAGTTGCCTCTGACAATTTCAGCCCGGCTAATAAAATCGGGGAGGGTGGTTTCGGTTCTGTATATAAGGGAGTGCTAAAAGGTGGGAAGTTAGCCGCTATAAAAGTGCTTTCAACTGAATCAAAACAGGGGGTGCAGGAATTCTTGACCGAGATTAATGTGATTTCAGAAATACAGCATGAAAATTTGGTTATACTATATGGATGTTGTGTGGAAGGAGATCACCGAATATTAGTCTACAATTACCTTGAGAACAATAGCCTTGCACAAACCCTTCTAGCTGGAGGTCACAGTAATATCTACTTCGATTGGCAAACACGGTGTAGGATATGCATTGGAGTTGCACGTGGACTTGCGTTTCTTCACGAGGAAGTGCAACCCCATATTGTTCACAGGGATATAAAAGCAAGCAATATTCTCCTTGACAAAGATCTCATGCCTAAGATTTCAGATTTTGGTCTTGCAAAACTTATTCCATCATACATGACTCATGTCAGCACACGTGTAGCAGGAACAATAGGTTATTTGGCACCAGAGTATGCAATAAGGGGGCAGTTGACACGTAAAGCAGATATTTACAGTTTTGGGGTCCTCCTTGTAGAGATAGTCAGTGGGAGATCCAACACAAATACAAGATTACCAATTGCAGATCAATATATTCTAGAAACGACATGGGACCTTTATGAGCGAAAGGAATTGGTACAGTTGGTAGACATATCACTAAACGGGGGATTTGATGTTGAGGAGGCATGTAAAATTCTGAAGATTGCACTTCTTTGTACTCAGGATACTCCTAAGCTACGGCCCACCATGTCTACTGTCGTCAAAATGCTCACTGGAGAAATGAATGTTGATGAAAGTAAGATAACAAAACCAGGCTTGATTTCAGATGTTATGGACCTTAAAATTAGACAACCTAAAAAACTTAAAGAAACGGAGACTACATATTCATACAATGCTTCCTCTAGCTCAGATAGCCAGGGTAATACTACCATGTCATTGGCTGCTTCAAGTGCTGCAACAACTTCAAGCTTTACTGTGAAATATGATTAA 1170 0.3966 MTCFAFLFGKKVSSDVRRDPVIDEGLSGIRIKVYTYKELKVASDNFSPANKIGEGGFGSVYKGVLKGGKLAAIKVLSTESKQGVQEFLTEINVISEIQHENLVILYGCCVEGDHRILVYNYLENNSLAQTLLAGGHSNIYFDWQTRCRICIGVARGLAFLHEEVQPHIVHRDIKASNILLDKDLMPKISDFGLAKLIPSYMTHVSTRVAGTIGYLAPEYAIRGQLTRKADIYSFGVLLVEIVSGRSNTNTRLPIADQYILETTWDLYERKELVQLVDISLNGGFDVEEACKILKIALLCTQDTPKLRPTMSTVVKMLTGEMNVDESKITKPGLISDVMDLKIRQPKKLKETETTYSYNASSSSDSQGNTTMSLAASSAATTSSFTVKYD* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1357 389 ProSitePatterns Protein kinases ATP-binding region signature. 52 74 IPR017441 GO:0005524
Tpr7g1357 389 Pfam Protein kinase domain 49 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g1357 389 Gene3D Transferase(Phosphotransferase) domain 1 122 332 - -
Tpr7g1357 389 PANTHER - 2 373 - -
Tpr7g1357 389 ProSiteProfiles Protein kinase domain profile. 46 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g1357 389 SMART serkin_6 46 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g1357 389 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 2 373 - -
Tpr7g1357 389 SUPERFAMILY Protein kinase-like (PK-like) 27 317 IPR011009 -
Tpr7g1357 389 CDD STKc_IRAK 52 319 - -
Tpr7g1357 389 Gene3D Phosphorylase Kinase; domain 1 21 121 - -
Tpr7g1357 389 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1357 Tpr-Chr7 14398879 14402518 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1357 17 336 Receptor kinase-like Gene Family AT1G56120 53.560 1.20e-112 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr7g1357 Pkinase 9.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1357 - - lja:Lj3g3v0422690.3 577.015