Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1339 ATGCCAGGGAATAAATACAACGGTGATTCAAATCATATACCAGGTCGTGTAGAGAGGTTATTAAGAGAAAGAGAGTTAAGGAAAAGTGGAAATAGAGGAATTCAATCCAACAATGAACAGTTGTTGGGTGATGAATATTTGGAGCAGGAGGATCACAATGTTGAGAAGATACCCGTAAAAGAGGGAAATAGAGTTGAGAGGCAAGAAAATGATGATCATGGGAAATATAGACAGAGACTTTTGGTTGTGGCAAACAGGTTGCCCGTGTCGGCAATAAGGAAAGGTGAAGATTCTTGGTCTTTGGAGATCAGTGCAGGTGGCTTAGTTAGTGCTCTCTTAGGTGTGAAGGAGTTTGAGGCAAGGTGGATAGGTTGGGCCGGAGTGAATGTTCCAGACGTGGTTGGACAGAAGACACTCACTAAAGCATTAGCCGAAAAGAGGTGTATCCCTGTATTTCTGGATGAAGAGATTGTTCATCAATATTACAATGGTTATTGCAACAACATTTTATGGCCCCTTTTCCATTACCTTGGACTTCCACAAGAAGACCGTCTTGCAACAACTCGCAGTTTCCAATCTCAATTTTTGGCCTATGAGAAAGCGAATCAAATGTTTGCTGATGTTGTGAACCAACACTATGAAGAGGGTGATGTTGTTTGGTGCCATGATTACCATCTTATGTTCCTCCCAAAATGCTTAAAGAAATATAATAGTAAAATGAAAGTTGGGTGGTTTCTTCACACCCCTTTTCCTTCTTCTGAAATTCATAGGACGCTGCCTTCTCGTTCTGAGCTCCTGCATTCTGTTCTTGCAGCTGATTTAGTTGGTTTTCACACGTATGATTATGCAAGACATTTTGTTAGTGCTTGTACTCGCATCCTTGGACTTGAGGGTACACCTTATGGGGTTGAGTATCAAGGGAAGCTAACTCGAGTTGCCGCATTTCCAATAGGGATTGACTCGGAACGATTTATACGTGCACTAGACCTTACTCAGGTGCAGGAGAATATGAAAGAATTGCAAGAAAGATTCAAAGGCAGAAAGGTAATGTTAGGCGTTGATCGGCTTGATATGATTAAAGGAATTCCTCAAAAAATTCTAGCATTTGAAAAGTTTTTGGAAGAAAATGCTTATTGGCGCGATAAAGTAGTTTTGCTTCAAATCGCTGTCCCAACAAGAACAGATGTTCCTGAATATCAAAAGCTTACAAGTCAGGTTCATGAAATTGTCGGTCGCATCAATGGACGATTTGGATCATTGACTACTGTTCCTATACATCACCTGGATCGCTCTCTTGACTTTCATGAACTATGTGCTTTGTATGCAGTTACTGATGTAGCGCTAGTCACATCTTTAAGGGATGGAATGAATCTTGTCAGCTATGAATTTGTGGCCTGCCAGGAGAAAAAGAAAGGGGTTCTCATTCTTAGTGAATTTGCTGGTGCAGCCCAGTCTCTTGGTGCTGGGGCAATTCTCGTCAATCCGTGGAATGTTACAGATGTTGCTACTGCAATTGGAAGAGCTCTGAATATGCTACCTGCAGAAAGAGAAAAGAGACATAAGCATAATTTTCTTCATGTGAAATCCCACACTGCACAAGAATGGGCAGGAACGTTTGTAAGTGAACTAAATGATACTGTTATTGAGGCACAACTAAGGACAAGACAAGTTCCGCCTAGGCTTCCAACTGACATTGCAATCAGACGTTATCTACACTCAACTAATAGATTGCTCATTTTGGGATTCAATGGAACTTTAACTGAACCAGTTGAGAAAACTGGAGATCAGATTAAAGAAATGGAACTTAAGGTGCATCCTGAATTGAGACAACCCTTGACAGCACTTTGCAGTGATCCAAATACCACAGTAGTTGTTCTCAGTGGAAGTGGTAGAAAAGTCCTAGATGATCAGAACTTCAAAGAATACGACATGTGGTTGGCAGCAGAGAATGGGATGTTTTTACAACCTTCAAAGGGTGAATGGATGACAACAATGCCAGAGCATCTGAATATGGAATGGGTCGACAGCGTGAAGCATGTTTTTGAGTACTTCACAGAAAGAACACCGCGGTCACATTTTGATTTCGAGGAGAGGGAAACTTCACTTGTTTGGAATTACAAATATGCAGATGTTGAGTTTGGTAAACTTCAAGCAAGAGACATGCTGCAACATCTATGGACAGGTCCGATTTCTAATTCGTCGGTTGAAGTTGTTCAAGGGAGCCGATCTGTTGAAGTTAGAGCTGTTGGTGTTACAAAGGGAGCCGCTATTGACCGCATCCTTGGTGAGATAGTTCATAGCAAATCCATGACATCACCAATTGATTATGTTCTTTGTATAGGACATTTTCTGGGGAAGGATGAAGATCTTTATACCTTTTTTGAGCCAGATCTTCCATCTATTGGTGTGAGTCTTCCGCGAAGTAAGTCAACAACAGAAGCAGTAAAGTTTCCTGCTGAGAAGAAACAAGCTTTAAAGATCCCAGCTAGTAGTAAAAATGGACCAAAATCATTATCTCAAAATAAGGTACAAAAACCAGTCTCAAATTCTGATCAGAAGAAAACAAATAATCAAATTTGCAGTTCACCACGACGCCCTGCTCAAGAAAATACATCATGGAATGTCCTTGACCTCAAGAAAGAGAATTACTTCTCATGTGCTGTAGGGAGAAACCGAACGAATGCTCGGTATACTCTTGCCTCACCGGATCATGTTGTAGAGTTTCTGATGGAACTAGCGGATGCATTACCACACTCTTTACTATATAGTTAA 2772 0.4098 MPGNKYNGDSNHIPGRVERLLRERELRKSGNRGIQSNNEQLLGDEYLEQEDHNVEKIPVKEGNRVERQENDDHGKYRQRLLVVANRLPVSAIRKGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDVVGQKTLTKALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFLAYEKANQMFADVVNQHYEEGDVVWCHDYHLMFLPKCLKKYNSKMKVGWFLHTPFPSSEIHRTLPSRSELLHSVLAADLVGFHTYDYARHFVSACTRILGLEGTPYGVEYQGKLTRVAAFPIGIDSERFIRALDLTQVQENMKELQERFKGRKVMLGVDRLDMIKGIPQKILAFEKFLEENAYWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGSLTTVPIHHLDRSLDFHELCALYAVTDVALVTSLRDGMNLVSYEFVACQEKKKGVLILSEFAGAAQSLGAGAILVNPWNVTDVATAIGRALNMLPAEREKRHKHNFLHVKSHTAQEWAGTFVSELNDTVIEAQLRTRQVPPRLPTDIAIRRYLHSTNRLLILGFNGTLTEPVEKTGDQIKEMELKVHPELRQPLTALCSDPNTTVVVLSGSGRKVLDDQNFKEYDMWLAAENGMFLQPSKGEWMTTMPEHLNMEWVDSVKHVFEYFTERTPRSHFDFEERETSLVWNYKYADVEFGKLQARDMLQHLWTGPISNSSVEVVQGSRSVEVRAVGVTKGAAIDRILGEIVHSKSMTSPIDYVLCIGHFLGKDEDLYTFFEPDLPSIGVSLPRSKSTTEAVKFPAEKKQALKIPASSKNGPKSLSQNKVQKPVSNSDQKKTNNQICSSPRRPAQENTSWNVLDLKKENYFSCAVGRNRTNARYTLASPDHVVEFLMELADALPHSLLYS* 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1339 923 Pfam Trehalose-phosphatase 582 803 IPR003337 GO:0003824|GO:0005992
Tpr7g1339 923 CDD GT20_TPS 79 544 IPR001830 GO:0003824|GO:0005992
Tpr7g1339 923 Gene3D - 667 749 - -
Tpr7g1339 923 CDD HAD_TPP 577 797 - -
Tpr7g1339 923 Gene3D Glycogen Phosphorylase B; 70 326 - -
Tpr7g1339 923 MobiDBLite consensus disorder prediction 830 867 - -
Tpr7g1339 923 Gene3D - 579 763 IPR023214 -
Tpr7g1339 923 TIGRFAM T6PP: trehalose-phosphatase 575 792 IPR003337 GO:0003824|GO:0005992
Tpr7g1339 923 MobiDBLite consensus disorder prediction 825 867 - -
Tpr7g1339 923 Pfam Glycosyltransferase family 20 79 544 IPR001830 GO:0003824|GO:0005992
Tpr7g1339 923 Gene3D Glycogen Phosphorylase B; 327 527 - -
Tpr7g1339 923 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 65 912 IPR001830 GO:0003824|GO:0005992
Tpr7g1339 923 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 65 912 - -
Tpr7g1339 923 SUPERFAMILY HAD-like 576 912 IPR036412 -
Tpr7g1339 923 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 78 546 - -
Tpr7g1339 923 TIGRFAM trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 79 544 IPR012766 GO:0003825|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1339 Tpr-Chr7 14197728 14224542 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1339 1 914 Trehalose Biosynthesis Gene Families AT1G78580 76.246 0.0 1436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1339 K16055 - gmx:100797320 1570.83