Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1322 ATGAAATTCTATTGCAAACCTTGTATTTATGTTAGTATCAAAATATGTTCTCAGGGCACAAGCAGGCCAACACATTATCATGTTCTTTTGGATGAGATTGGCTTTTCCCCAGATGATTTACAGGAGCTTGTGCACTCGGTTTCTTATGTATATGGTGTGAGTCCATTTACGCCATTGAAAGGACTCTTTATTCAAGGTCCTGTCTTCATTAGTTTTTTTCTTGCGATAACCAACATGGCTGAAAAAATGCCATCATTCAAGCATGGTGGAGCTTTATGGTTTGCTGATCTCTCAACTCCAGATGCCTTATACATTTTTCCAGTTTTAACTGCATTGTCATTCTTAGTAGTTGTAGAGTGTATTATGCAAGAAGGAATGGAAGGAAATCCTGTGGCTGGCACCATGAAAAATTTCTCAAGGGTTCTTGCTCTTCTTTCAGTTCCTTTCACCATGAGTTTTCCGAAGGGAGCAAAGGAAAATGGCATCTCATTCTCATGCTCAGGCTTATAA 510 0.3902 MKFYCKPCIYVSIKICSQGTSRPTHYHVLLDEIGFSPDDLQELVHSVSYVYGVSPFTPLKGLFIQGPVFISFFLAITNMAEKMPSFKHGGALWFADLSTPDALYIFPVLTALSFLVVVECIMQEGMEGNPVAGTMKNFSRVLALLSVPFTMSFPKGAKENGISFSCSGL* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1322 169 PANTHER MITOCHONDRIAL INNER MEMBRANE PROTEIN OXA1-RELATED 41 155 - -
Tpr7g1322 169 PANTHER OXA1 41 155 IPR001708 GO:0016021|GO:0032977
Tpr7g1322 169 Gene3D - 6 59 IPR036397 GO:0003676
Tpr7g1322 169 Pfam Piwi domain 10 54 IPR003165 GO:0003676
Tpr7g1322 169 SUPERFAMILY Ribonuclease H-like 14 54 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1322 Tpr-Chr7 14011336 14015812 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1322 5 52 Eukaryotic Initiation Factors Gene Family AT1G48410 46.154 7.80e-08 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1322 K03217 - gmx:100792907 194.126