Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1320 ATGCCGAAGGCTAAACTTGATAACAGTGCACCACAATGGGCTAGTGTGAACTTAGGAATTTTCATTTGCATGCAATATTCAGGGATTCAACGGAGTCTTGGAGTGCATATATCAAAGGTGAGGTCCACAACTTTGGATACATGGTTGCCAGAACAAGTTTCTTTCATGCAATATACGGATAATGTGAAGACAAATAAGCCCTGGGAAGCTAAACTGCCACCAAATTTTGACAGAAATGGATGTGGAATCGAGAAGTTTATCTGTGCCGAGCCACCACGAGGGGCTAGTGTGTGA 294 0.432 MPKAKLDNSAPQWASVNLGIFICMQYSGIQRSLGVHISKVRSTTLDTWLPEQVSFMQYTDNVKTNKPWEAKLPPNFDRNGCGIEKFICAEPPRGASV* 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1320 97 CDD ArfGap 11 87 - -
Tpr7g1320 97 Gene3D Arf GTPase activating protein 4 90 IPR038508 -
Tpr7g1320 97 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD15-RELATED 8 89 - -
Tpr7g1320 97 ProSiteProfiles ARF GTPase-activating proteins domain profile. 11 72 IPR001164 GO:0005096
Tpr7g1320 97 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 8 89 IPR044520 GO:0005096
Tpr7g1320 97 SMART arf_gap_3 3 95 IPR001164 GO:0005096
Tpr7g1320 97 PRINTS HIV Rev interacting protein signature 19 36 IPR001164 GO:0005096
Tpr7g1320 97 PRINTS HIV Rev interacting protein signature 40 61 IPR001164 GO:0005096
Tpr7g1320 97 Pfam Putative GTPase activating protein for Arf 8 78 IPR001164 GO:0005096
Tpr7g1320 97 SUPERFAMILY ArfGap/RecO-like zinc finger 9 76 IPR037278 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1320 Tpr-Chr7 13965526 13968413 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1320 9 80 C2H2 Transcription Factor Family AT4G05330 47.945 6.25e-17 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1320 K12486 - gmx:100780727 139.428