Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1318 ATGACTTCTCTTCAAAAGTTATACATAGGATCTAATAGTTTGAACTCTAGCAGCATACCTTCCTCTCTTTGGAGTCTTAAAGATATATTAGAAGTAAATTTGTCCTCTAATGCTTTCATTGGTAATCTTCCACTTGAGATTGGAAACTTGAAAGCAATTGTAATATTAGATCTATCAAGAAATCATATTTCAGGCAACATTCCTGCAACCATCGGTTCTGTAATAACTTTGCAGAATCTCTCCTTAGCACATAACAAACTGATGGGATCAATTCCCGCATCATTGGATCAAATGGTAAGCTTGATATCCTTGGACTTGTCCCAAAATATGCTAACAGGTGTTATTCCAAAATCCTTAGAATCACTTTTGTATCTTCAAAACATCAACTTGTCATATAATAGATTACAAGGAGAGATTCCTGATGGTGGACCATTCAAAAAGTTCACAGCTCAGTCATTTAAGCATAATGAAGCACTGTGTGGAAATCCTCGCCTCCAAGTACCTCGGTGTGGTAAACAAGTTAAGAAAAGGTCAATTTCAAAGAAGTTATTACTCAAATGCCTAATTCCTATACTTGTGTCGACCTTTTTGCTTGTTGCATGCATTATACTTGTAAAACATAATAAAAGGAAAAAGGTTGAAAATACTCCTGAAAGGGGTTTATCAACTTTAGGAGCTCCAAGAAGAATATCCTATTATGAACTTGTGCAAGCAACTAATGGATTCAATGAGAGTAACTTACTTGGAAATGGGGGATTTGGCTCTGTGTATCAGGGGAAGCTTCCTGATGGTGAGATGATCGCAGTTAAAGTAATTGATTTGCAGTCAGAGGCAAAATCAAGGAGCTTTGATGCAGAATGCAATGCAATGAAAGAACTACGACATCGAAATCTGGTTAAGATTATCAGTAGTTGTTCAAATCTTGATTTCAAATCATTGGTGATGGAGTTCATGTCGAATGGAAGTGTGGACAAATGGTTATATTTGTTAGAAATACGGTATGATAATCCTGGATATCTTCGAAGAATCGTGTTCGTTCACTTTCTGAACAAAGTATTTCGACCCTATTCTTGTCTGGGTTCACGAAATCTTTGCGGGGATAATTCTCGAAGAGCAATCTGTTTCTGA 1128 0.3652 MTSLQKLYIGSNSLNSSSIPSSLWSLKDILEVNLSSNAFIGNLPLEIGNLKAIVILDLSRNHISGNIPATIGSVITLQNLSLAHNKLMGSIPASLDQMVSLISLDLSQNMLTGVIPKSLESLLYLQNINLSYNRLQGEIPDGGPFKKFTAQSFKHNEALCGNPRLQVPRCGKQVKKRSISKKLLLKCLIPILVSTFLLVACIILVKHNKRKKVENTPERGLSTLGAPRRISYYELVQATNGFNESNLLGNGGFGSVYQGKLPDGEMIAVKVIDLQSEAKSRSFDAECNAMKELRHRNLVKIISSCSNLDFKSLVMEFMSNGSVDKWLYLLEIRYDNPGYLRRIVFVHFLNKVFRPYSCLGSRNLCGDNSRRAICF* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1318 375 PANTHER RECEPTOR-LIKE PROTEIN 55 1 328 - -
Tpr7g1318 375 Gene3D Ribonuclease Inhibitor 1 178 IPR032675 -
Tpr7g1318 375 Gene3D Phosphorylase Kinase; domain 1 225 317 - -
Tpr7g1318 375 ProSiteProfiles Protein kinase domain profile. 242 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g1318 375 Pfam Leucine rich repeat 76 135 IPR001611 GO:0005515
Tpr7g1318 375 Pfam Protein kinase domain 243 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g1318 375 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 1 328 - -
Tpr7g1318 375 SUPERFAMILY L domain-like 2 163 - -
Tpr7g1318 375 ProSitePatterns Protein kinases ATP-binding region signature. 248 270 IPR017441 GO:0005524
Tpr7g1318 375 SUPERFAMILY Protein kinase-like (PK-like) 223 328 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1318 Tpr-Chr7 13908926 13911044 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1318 1 333 Receptor kinase-like Gene Family AT3G47570 36.043 1.79e-58 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Tpr7g1318 Pkinase 2.5e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1318 - K13420 mtr:MTR_0070s0020 497.278