Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1307 ATGGGGTTAGGTGGTGTGAATGGTAAGGTGATAGAGTCTTTGGATGTGGGTAAATCAAAAGGGAGGAAGAAAAAGAAGTTACAAAATGGGGCAATGGAAGATGAAGAAAATGATTCTGGGTGTTGGCATAGCTTTAGGTTCATTGGTAACTGCATTTCTTCAAGATCCAAGGTTGATAGTTCTGTTAGTGGTACCAGTAATAATTATGCTGAAAGCAAATCAACTATTGATACGAGTAGAGACCAGCCATCAGTTCCAGTAGTCTCTTCGACGACTACTACTACTAGTAATGCTGAAAGCAGCTCATCTACTTCGAAACTTGAAGAGGAGCTTAAAATTGCTTCCAGGCTGCGAAAGTTCTCTTTCAATGATCTTAAGCTGGCAACAAGAAATTTTCGGCCCGAGAGTCTTCTTGGTGAAGGTGGGTTTGGTTGTGTGTTCAAAGGATGGATTGAAGAAAATGGAACTGCTCCAGTGAAACCTGGCACAGGCCTTACTGTTGCAGTCAAAACCCTAAACCATGATGGGCTCCAGGGTCATAAAGAATGGCTGGCTGAAGTAAATTATCTTGGTGATTTAGTTCATCAAAACCTTGTCAAACTTATAGGCTACTGTATTGAAGATGATCAAAGGTTGCTGGTATATGAATTTATGCCTCGAGGAAGCCTGGAAAACCACTTGTTTAGGAGATCCTTGCCACTTCCGTGGTCCATAAGGATGAAAATTGCGCTAGGAGCTGCAAAGGGACTTGCTTTTCTTCACGAGGAAGCTGAACGACCAGTTATATATAGGGATTTTAAAACTTCCAATATACTATTGGATGCAGAGTACAATGCCAAGCTCTCAGACTTTGGACTTGCAAAAGATGGTCCAGAGGGTGATAAAACTCATGTGTCTACCCGAGTTATGGGAACTTATGGTTACGCAGCACCAGAATATGTCATGACAGGGCATCTTACATCAAGAAGTGATGTGTATAGTTTTGGAGTGGTACTACTTGAGATGATAACCGGGCGAAGATCCATGGACAAAAACCGTCCAAATGGTGAACATAACCTTGTAGAATGGGCTAGACCGCATCTAGGAGAGAGAAGAAGGTTCTACAGGTTGATAGACCCTCGATTGGAAGGCCACTTCTCGATAAAAGGAGCTCAAAAAGCCGCCCAGTTGGCTGCTCACTGCCTTAGCCGAGATCCAAAAGCAAGACCACTAATGAGTGAAGTTGTAGAAGCTTTGATGCCTCTCCCAAACCTAAAGGACATGGCTAGTTCATCATACTATTTCCAGACGATGCAAGCTGACCGATTTAGTGCCAGTCCAAATACTCGAAATGGTAGAACACAAGGAGGATCCGCCCGAAATGGACAACAACAAAGGAGCCTTTCCATATCACATGGTACTCATGCTTCTCCATTTCGCCATCGGTATCCTCAAAATTCACCAAAGCCAACTGGAAAAGCACAGAGTTGA 1470 0.4327 MGLGGVNGKVIESLDVGKSKGRKKKKLQNGAMEDEENDSGCWHSFRFIGNCISSRSKVDSSVSGTSNNYAESKSTIDTSRDQPSVPVVSSTTTTTSNAESSSSTSKLEEELKIASRLRKFSFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNYLGDLVHQNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMITGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALMPLPNLKDMASSSYYFQTMQADRFSASPNTRNGRTQGGSARNGQQQRSLSISHGTHASPFRHRYPQNSPKPTGKAQS* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1307 489 ProSitePatterns Serine/Threonine protein kinases active-site signature. 261 273 IPR008271 GO:0004672|GO:0006468
Tpr7g1307 489 PANTHER OS01G0588500 PROTEIN-RELATED 70 477 - -
Tpr7g1307 489 ProSitePatterns Protein kinases ATP-binding region signature. 138 170 IPR017441 GO:0005524
Tpr7g1307 489 Gene3D Phosphorylase Kinase; domain 1 106 217 - -
Tpr7g1307 489 Pfam Protein tyrosine and serine/threonine kinase 136 412 IPR001245 GO:0004672|GO:0006468
Tpr7g1307 489 PANTHER KINASE APK1B, CHLOROPLAST, PUTATIVE-RELATED 70 477 - -
Tpr7g1307 489 MobiDBLite consensus disorder prediction 62 104 - -
Tpr7g1307 489 CDD STKc_IRAK 138 415 - -
Tpr7g1307 489 MobiDBLite consensus disorder prediction 437 489 - -
Tpr7g1307 489 ProSiteProfiles Protein kinase domain profile. 132 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g1307 489 MobiDBLite consensus disorder prediction 437 467 - -
Tpr7g1307 489 Gene3D Transferase(Phosphotransferase) domain 1 218 433 - -
Tpr7g1307 489 SUPERFAMILY Protein kinase-like (PK-like) 110 412 IPR011009 -
Tpr7g1307 489 MobiDBLite consensus disorder prediction 62 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1307 Tpr-Chr7 13732898 13737209 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1307 95 412 Glycoside Hydrolase AT3G07070 56.698 7.65e-119 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Tpr7g1307 PK_Tyr_Ser-Thr 8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1307 - - gmx:100787127 844.343