Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1279 ATGGAACTTGCACTTGTGAAAAATGAATTAAGTCCAAGAAGTCATAGATTGCTCATGTTGGAAGCTGATTCTGTTGTAACTACTAAATGTGTCAAAAGGCGGCGAAGAGATTCGTCTATTGCACAACAAGGTGATGTATCAGAAATGCAGCAGCCACTGAGTGGACAAGCAACCACTGTGAAGAGAAGCTCAAAGTTTAGAGGTGTTAGCAGACATAGGTGGACTGGAAGGTATGAAGCTCATTTATGGGATAAAGGAACATGGAATCCAACTCAAAAGAAAAAAGGAAAGCAAGTATATTTGGGAGCATATAATGATGAAGAAGCTGCTGCTAGAGCTTATGATTTGGCTGCACTCAAGTATTGGGGAACATCAACTTTTACAAATTTTCCTGTATCTGATTATGAGAAAGAAATTGAGATAATGATAACTATGAGCAAAGAAGAGTATCTTGCTTCTTTGAGAAGGAGGAGCAGTGGTTTTTCTAGAGGTGTTTCAAAATATAGAGGGGTAGCAAGGCACCATCACAATGGAAGATGGGAGGCAAGGATTGGGAGAGTGTTCGGCAACAAGTATCTCTACCTCGGGACTTATGGTACACAAGAAGAGGCGGCTCGCGCGTACGATATCGCAGCAATTGAATACCGAGGCATAAATGCAGTAACAAACTTTGATTTAAGCACCTACATTAGATGGTTAAGGCCAGGACCAAATTCAACTACTTCACAAGAACAAAAGCAAAACACGGAACTTCAAGTACCCTTTGCAGCCACTAATTCAATCCAAACAAGAACAAACATTGATGCATCCAACTCCAACATCAATCCAGAAAAGCTTTTGCAAGTTGAAACTACAAAGAAGCGAGACTTTTCCAACCTTATGATGACACCTTTAAGTTCTTGCAATAAACCAGCTTCACCAACAGCATTAGGACTTCTACTAAAATCTTCGGTATTTAGAGAACTAATGCAGAGAAACCTGAATTGTTCTAGTGAAGACGAAGAAGAAGTTGAATTGAAATATCCTCAAGAAAGTATTAGAGGGGTTTTTGATATCGAAAACAACAGTAACACTTATTTGTGCTCTTCTAATGTCAACAAATTACCTTCCTTGGTGTCATCAGAAGAGGGGTCGTCGCCTATGTATCATGGAACTATGCAATCCCTATCAAGATTCGAATCCCGGTTGGGAAAAGTTTCCACATTTAGTACGCAACAGTGCCTCGAATAG 1230 0.3992 MELALVKNELSPRSHRLLMLEADSVVTTKCVKRRRRDSSIAQQGDVSEMQQPLSGQATTVKRSSKFRGVSRHRWTGRYEAHLWDKGTWNPTQKKKGKQVYLGAYNDEEAAARAYDLAALKYWGTSTFTNFPVSDYEKEIEIMITMSKEEYLASLRRRSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYGTQEEAARAYDIAAIEYRGINAVTNFDLSTYIRWLRPGPNSTTSQEQKQNTELQVPFAATNSIQTRTNIDASNSNINPEKLLQVETTKKRDFSNLMMTPLSSCNKPASPTALGLLLKSSVFRELMQRNLNCSSEDEEEVELKYPQESIRGVFDIENNSNTYLCSSNVNKLPSLVSSEEGSSPMYHGTMQSLSRFESRLGKVSTFSTQQCLE* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1279 409 MobiDBLite consensus disorder prediction 36 62 - -
Tpr7g1279 409 ProSiteProfiles AP2/ERF domain profile. 167 225 IPR001471 GO:0003700|GO:0006355
Tpr7g1279 409 SUPERFAMILY DNA-binding domain 166 227 IPR016177 GO:0003677
Tpr7g1279 409 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 392 - -
Tpr7g1279 409 CDD AP2 166 227 IPR001471 GO:0003700|GO:0006355
Tpr7g1279 409 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 392 - -
Tpr7g1279 409 Gene3D AP2/ERF domain 166 227 IPR036955 GO:0003700|GO:0006355
Tpr7g1279 409 Gene3D AP2/ERF domain 64 133 IPR036955 GO:0003700|GO:0006355
Tpr7g1279 409 MobiDBLite consensus disorder prediction 42 62 - -
Tpr7g1279 409 SUPERFAMILY DNA-binding domain 64 133 IPR016177 GO:0003677
Tpr7g1279 409 ProSiteProfiles AP2/ERF domain profile. 65 131 IPR001471 GO:0003700|GO:0006355
Tpr7g1279 409 Pfam AP2 domain 64 123 IPR001471 GO:0003700|GO:0006355
Tpr7g1279 409 Pfam AP2 domain 166 217 IPR001471 GO:0003700|GO:0006355
Tpr7g1279 409 PRINTS Ethylene responsive element binding protein signature 66 77 IPR001471 GO:0003700|GO:0006355
Tpr7g1279 409 PRINTS Ethylene responsive element binding protein signature 207 227 IPR001471 GO:0003700|GO:0006355
Tpr7g1279 409 SMART rav1_2 167 231 IPR001471 GO:0003700|GO:0006355
Tpr7g1279 409 SMART rav1_2 65 137 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1279 Tpr-Chr7 13532064 13537439 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1279 61 274 AP2-EREBP Transcription Factor Family AT5G17430 59.070 1.32e-83 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Tpr7g1279 AP2 3.6e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1279 - - gmx:100799621 587.8