Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1265 ATGGTTGCACATGTTAGTGATTTTGGTATTGCAAAACTCATGGATGAAGGACAATCTAAAACACATACTCAGACTTTGGCTACTATTGGATACCTTGCACCAGAGTATGGATCTAGAGGAATTGTTTCTGTCAAAGGAGATGTATACAGCTATGGAATTATGCTAATGGAAATCTTCACAGGAAAAAAACCAACAGATGATATGTTTGTTGCAGAGCTAAGTTTGAAAACATGGATCTGTGAATCATTGCCTAATTCAATTATGGATGTCTTGGATTCTAATTTAGTCCAACAAAATGGGGAACAAATCATTGACATATTGACTTACATGTCATCTATTTTTGGTTTAGCCCTGAACTGCTGTGAAGATTCACCCGAAGCAAGAATTATTATGGCAGATGTTACTGCGTTGCTAATCAAAATCAAGACTTCGGTTCTTGGTGCAAATAGGGCCTAG 456 0.3706 MVAHVSDFGIAKLMDEGQSKTHTQTLATIGYLAPEYGSRGIVSVKGDVYSYGIMLMEIFTGKKPTDDMFVAELSLKTWICESLPNSIMDVLDSNLVQQNGEQIIDILTYMSSIFGLALNCCEDSPEARIIMADVTALLIKIKTSVLGANRA* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1265 151 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 1 146 - -
Tpr7g1265 151 SUPERFAMILY Protein kinase-like (PK-like) 2 141 IPR011009 -
Tpr7g1265 151 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 1 146 - -
Tpr7g1265 151 Pfam Protein tyrosine and serine/threonine kinase 2 134 IPR001245 GO:0004672|GO:0006468
Tpr7g1265 151 ProSiteProfiles Protein kinase domain profile. 1 146 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g1265 151 Gene3D Transferase(Phosphotransferase) domain 1 1 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1265 Tpr-Chr7 13230667 13231272 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1265 1 150 Receptor kinase-like Gene Family AT3G47570 36.538 2.25e-31 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Tpr7g1265 PK_Tyr_Ser-Thr 3.1e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1265 - K04733 mtr:MTR_0070s0020 251.906