Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1263 ATGTCTAACACTACTTATAGGAAACTGAAAAACAAGGAAGTTAACTTGTTAGGCTATTTTGACACAAAAAAATTTTTGGAAATTACGATTAAGGATAAAAAGTGTAATTTTAACTATTTTGTTTCCATTCATGAAATTGGAAACATTAGCAACTTGCTATACTTTTCTGTATATGGGAATAATATAAATGGACCAATACCTGCTACATTCAAAGGGTTGAAAAATCTTCAGGGATTGGACCTTAGCAACAATGGACTACAAGGATCATTTATTGAGGAGCTTTGTAAAGTTGAGAGGTTGAGTGAGTTGTATCTAGACAATAATAAGCTCTCTGGTGTTTTACCGACGTGTTTGGGAAATATGACTTCTCTTCAAAAGTTATACATAGGATCTAATAGTTTGAACTCTAGCAGCATACCTTCCTCTCTTTGGAGTCTTAAAGATATATTAGAAGTAAATTTGTCCTCTAATGCTTTCATTGGTAATCTTCCACTTGAGATTGGAAACTTGAAAGCAATTGTAATATTAGATCTATCAAGAAATCATATTTCAGGCAACATTCCTGCAACCATCGGTTCTGTAATAACTTTGCAGAATCTCTCCTTAGCACATAACAAACTGATGGGATCAATTCCCGCATCATTGGATCAAATGGTAAGCTTGATATCCTTGGACTTGTCCCAAAATATGCTAACAGGTGTTATTCCAAAATCCTTAGAATCACTTTTGTATCTTCAAAACATCAACTTGTCATATAATAGATTACAAGGAGAGATTCCTGATGGTGGACCATTCAAAAAGTTCACAGCTCAGTCATTTAAGCATAATGAAGCACTGTGTGGAAATCCTCGCCTCCAAGTACCTCGGTGTGGTAAACAAGTTAAGAAAAGGTCAATTTCAAAGAAGTTATTACTCAAATGCCTAATTCCTATACTTGTGTCGACCTTTTTGCTTGTTGCATGCATTATACTTGTAAAACATAATAAAAGGAAAAAGGTTGAAAATACTCCTGAAAGGGGTTTATCAACTTTAGGAGCTCCAAGAAGAATATCCTATTATGAACTTGTGCAAGCAACTAATGGATTCAATGAGAGTAACTTACTTGGAAATGGGGGATTTGGCTCTGTGTATCAGGGGAAGCTTCCTGATGGTGAGATGATCGCAGTTAAAGTAATTGATTTGCAGTCAGAGGCAAAATCAAGGAGCTTTGATGCAGAATGCAATGCAATGAAAGAACTACGACATCGAAATCTGGTTAAGATTATCAGTAGTTGTTCAAATCTTGATTTCAAATCATTGGTGATGGAGTTCATGTCGAATGGAAGTGTGGACAAATGGTTATATTTGTTAGAAATACGGTATGATAATCCTGGATATCTTCGAAGAATCGTGTTCGTTCACTTTCTGAACAAAGTATTTCGACCCTATTCTTGTCTGGGTTCACGAAATCTTTGCGGGGATAATTCTCGAAGAGCAATCTGTTTCTGA 1488 0.3555 MSNTTYRKLKNKEVNLLGYFDTKKFLEITIKDKKCNFNYFVSIHEIGNISNLLYFSVYGNNINGPIPATFKGLKNLQGLDLSNNGLQGSFIEELCKVERLSELYLDNNKLSGVLPTCLGNMTSLQKLYIGSNSLNSSSIPSSLWSLKDILEVNLSSNAFIGNLPLEIGNLKAIVILDLSRNHISGNIPATIGSVITLQNLSLAHNKLMGSIPASLDQMVSLISLDLSQNMLTGVIPKSLESLLYLQNINLSYNRLQGEIPDGGPFKKFTAQSFKHNEALCGNPRLQVPRCGKQVKKRSISKKLLLKCLIPILVSTFLLVACIILVKHNKRKKVENTPERGLSTLGAPRRISYYELVQATNGFNESNLLGNGGFGSVYQGKLPDGEMIAVKVIDLQSEAKSRSFDAECNAMKELRHRNLVKIISSCSNLDFKSLVMEFMSNGSVDKWLYLLEIRYDNPGYLRRIVFVHFLNKVFRPYSCLGSRNLCGDNSRRAICF* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1263 495 SMART LRR_typ_2 170 194 IPR003591 -
Tpr7g1263 495 SMART LRR_typ_2 121 146 IPR003591 -
Tpr7g1263 495 SMART LRR_typ_2 218 241 IPR003591 -
Tpr7g1263 495 SMART LRR_typ_2 97 120 IPR003591 -
Tpr7g1263 495 Pfam Protein kinase domain 363 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g1263 495 Pfam Leucine rich repeat 99 158 IPR001611 GO:0005515
Tpr7g1263 495 Pfam Leucine rich repeat 196 255 IPR001611 GO:0005515
Tpr7g1263 495 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 31 452 - -
Tpr7g1263 495 ProSitePatterns Protein kinases ATP-binding region signature. 368 390 IPR017441 GO:0005524
Tpr7g1263 495 ProSiteProfiles Protein kinase domain profile. 362 495 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g1263 495 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 31 452 - -
Tpr7g1263 495 Gene3D Phosphorylase Kinase; domain 1 345 437 - -
Tpr7g1263 495 Gene3D Ribonuclease Inhibitor 29 298 IPR032675 -
Tpr7g1263 495 SUPERFAMILY Protein kinase-like (PK-like) 343 448 IPR011009 -
Tpr7g1263 495 SUPERFAMILY L domain-like 44 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1263 Tpr-Chr7 13210238 13211775 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1263 44 453 Receptor kinase-like Gene Family AT3G47570 38.061 4.12e-77 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Tpr7g1263 Pkinase 4e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1263 - K13420 mtr:MTR_0070s0020 606.675