Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1262 ATGGTGAATCTATTATTATCTTGTTGTATCTTTCTTTTTTGGCTCTCACTGCATTGTATCGTGCCTTGCTTAGCTGCTGCAAATAAAAAAAACATTACCACAGATGAATCTTCTCTTCTAGCATTCAAATCCCTCATTACCTCCTCAGACCCCAATAATTATGTATTGGCTAATTGGTCAACCTCATCTTCTGTATGCAATTGGGTTGGTGTCACTTGTGATGAGAGACACAATAGAGTCAACACCTTGAATCTTACAAACATGGGTCTTAGAGGTACTGTATCTCCAAACTTGGGAAATTTATCCTTCCTTGTCAAACTTGACCTCTCCCATAATAGTTTTGGTGGTCAGTTACCTAAAGAGATATGTTCGTTGCACCGATTGAAGATTCTTCATATAAGCTATAACCAGTTTGTTGGAGAAATTCCGACAGCGTTAGGTAACTTATCAAAACTTGAAATTTTGTATATTGGCGCTAACAATCTAAGAGGTTTTATTCCCCAATCGATCGCCAACCTTCGTCAGTTGAAAATTTTGGATGCTATGGCCAACCGGCTGTCTGGACCCATTCCTCAATCAATTTTTAATCTCTCTTCACTTGAAGAAATGGGTCTATCTTCCAACAACTTATCAGGATTTATCCCTCAATCCATCGGTATTTTTCCTCGGTTGAAACTTTTGTATCTGCATGCTAACCGGTTGTCTGGACTTATTCCTCAAACAATTTCAAACTTGTCTTCACTTGAAGAGATATACTTAAAGAATAATTACTTTTCAGGTCCAATACCCGAGGACATTCACTATCTTGATCAACTTGAGATTCTCAATTTGAAAAAAAACGACCTTAGTGGATCTATTCCATCCAAACTCCTCAACATGTCATCACTGACATTCTTGCAGCTTGAAGAAAATCACCTCTCAGGCATAATTCCATCAAATATGGGATATAGCCTTCCTAACTTGCAAGTGCTACACTTGAATGACAACAGTTTTGTTGGAAATATTCCAAAAACAATATTCAATTCTTCTAAGCTCATTGAATTTCAATTAAATAACAATGCATTCAATGGAACTCTGCCCAATAATGCTTTTGGAAATTTAAGGTTCCTCGAAGCAATTCTCATACTTAACAACAATTTGACAATAGATGATTCTCTTCAATTTTTTACTTCCTTGTCAAATTGTAGATATTTAAAATATCTAGAACTATCATTGAATCCTATACTTTCCAGTCTTCCTAAATCTATTGGAAACTTAACTTGCAACCAATTTGGGGCAGATTCATGTGGAATTGTTGGTAATATTCCCTTAGAAGTTGGTAACATGAGCAACTTGCTATATTTATCACTAAACGGGAATAATAATATAAATGGACCAATACCTGCTACATTCAAAGGGTTACAAAAACTTCAGGTATTAAATCTTGCAAACAATGGACTAGAAGGATCATTTATTGAGGAGATTTGTAAAATTGAAAGTTTGGGTGAGTTGTATCTACAAAATAATAAGCTTTCTGGAATTTTACCAATGTGTTTGGGGAATATGACCTCTCTTATAAAGATACACATAGGGTCTAACAGTTTGAACTCTCGATTACCTTCCTCTCTTTGGAGTCTTAAAGATATATTAGAAGTAAATTTGTCATCTAATGCATTCATTGGTAATCTTCCACCTGAGATTGGGAATTTGAGAGCAATTATACTATTAGATCTATCCAGAAATCATATTTCAGGCAACATTCCTGCAACCATCGGTTCTGTAATAACTTTGCAGAATCTCTCCTTAGCGCATAACAAACTGATGGGATCAATTGCCACATCATTTGGTGAAATGGTAAGCTTGATATCCTTGGACTTGTCCCAAAATATGCTAACAGGTGTTATTCCAAAATCCTTACAATCACTTTTGTATCTTCAAAACATCAACTTGTCATATAATAGATTACAAGGAGAGATTCCTGATGGTGGACCATTCAAAAAGTTCACAGCTCAGTCATTTAAGCATAATGAAGCACTGTGTGGAAATCCTCGCCTCCAAGTACCTCGGTGTGGTAAACAAGTTAAGAAAAGGTCAATTTCAAAGAAGTTATTACTCAAATTCCTAATTCCTATACTTGTGTCGACCTTTTTGCTTGTTGCATGCATTATACTTGTAAAACATAATAAAAGGAAAAAAGTTGAAAATACTCCTGAAAGGGGTTTATCAACTTTAGGAGCTCCAAGAAGAATATCCTATTATGAACTTGTGCAAGCAACTAATGGATTCAATGAGAGTAACTTACTTGGAAATGGGGGATTTGGCTCTGTGTATCAGGGAAAGCTTCCTGATGGTGAGATGATCGCAGTTAAAGTAATTGATTTGCAGTCAGAGGCAAAATCAAGGAGCTTTGATGCAGAATGCAATGCAATGAAAGAACTACGACATCGAAATCTGGTTAAGATTATCAGTAGTTGTTCAAATCTTGATTTCAAAGCACTGGTGATGGAGTTCATGTTGAATGGAAGTGTGGACAAATGGTTATATTCATATAACTATTGTTTAAATTTCTTACAAAGGTTAAACATAATGATAGATGTTGCATCTGCATTAGAATATCTCCATCATGTTTGTCAAAAAAAAAAAATATCTCCATCATGGTTCTTCAGTTCCAGTGGTTCATTGTGA 2664 0.3544 MVNLLLSCCIFLFWLSLHCIVPCLAAANKKNITTDESSLLAFKSLITSSDPNNYVLANWSTSSSVCNWVGVTCDERHNRVNTLNLTNMGLRGTVSPNLGNLSFLVKLDLSHNSFGGQLPKEICSLHRLKILHISYNQFVGEIPTALGNLSKLEILYIGANNLRGFIPQSIANLRQLKILDAMANRLSGPIPQSIFNLSSLEEMGLSSNNLSGFIPQSIGIFPRLKLLYLHANRLSGLIPQTISNLSSLEEIYLKNNYFSGPIPEDIHYLDQLEILNLKKNDLSGSIPSKLLNMSSLTFLQLEENHLSGIIPSNMGYSLPNLQVLHLNDNSFVGNIPKTIFNSSKLIEFQLNNNAFNGTLPNNAFGNLRFLEAILILNNNLTIDDSLQFFTSLSNCRYLKYLELSLNPILSSLPKSIGNLTCNQFGADSCGIVGNIPLEVGNMSNLLYLSLNGNNNINGPIPATFKGLQKLQVLNLANNGLEGSFIEEICKIESLGELYLQNNKLSGILPMCLGNMTSLIKIHIGSNSLNSRLPSSLWSLKDILEVNLSSNAFIGNLPPEIGNLRAIILLDLSRNHISGNIPATIGSVITLQNLSLAHNKLMGSIATSFGEMVSLISLDLSQNMLTGVIPKSLQSLLYLQNINLSYNRLQGEIPDGGPFKKFTAQSFKHNEALCGNPRLQVPRCGKQVKKRSISKKLLLKFLIPILVSTFLLVACIILVKHNKRKKVENTPERGLSTLGAPRRISYYELVQATNGFNESNLLGNGGFGSVYQGKLPDGEMIAVKVIDLQSEAKSRSFDAECNAMKELRHRNLVKIISSCSNLDFKALVMEFMLNGSVDKWLYSYNYCLNFLQRLNIMIDVASALEYLHHVCQKKKISPSWFFSSSGSL* 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1262 887 Pfam Leucine rich repeat N-terminal domain 34 74 IPR013210 -
Tpr7g1262 887 Pfam Leucine rich repeat 222 282 IPR001611 GO:0005515
Tpr7g1262 887 Pfam Leucine rich repeat 589 648 IPR001611 GO:0005515
Tpr7g1262 887 Pfam Leucine rich repeat 127 186 IPR001611 GO:0005515
Tpr7g1262 887 SUPERFAMILY L domain-like 428 676 - -
Tpr7g1262 887 PANTHER - 128 872 - -
Tpr7g1262 887 PANTHER - 12 288 - -
Tpr7g1262 887 ProSitePatterns Protein kinases ATP-binding region signature. 761 783 IPR017441 GO:0005524
Tpr7g1262 887 SMART LRR_typ_2 491 514 IPR003591 -
Tpr7g1262 887 SMART LRR_typ_2 318 342 IPR003591 -
Tpr7g1262 887 SMART LRR_typ_2 197 220 IPR003591 -
Tpr7g1262 887 SMART LRR_typ_2 221 244 IPR003591 -
Tpr7g1262 887 SMART LRR_typ_2 293 317 IPR003591 -
Tpr7g1262 887 SMART LRR_typ_2 611 634 IPR003591 -
Tpr7g1262 887 SMART LRR_typ_2 563 587 IPR003591 -
Tpr7g1262 887 SMART LRR_typ_2 101 125 IPR003591 -
Tpr7g1262 887 SMART LRR_typ_2 149 172 IPR003591 -
Tpr7g1262 887 SMART LRR_typ_2 515 539 IPR003591 -
Tpr7g1262 887 SUPERFAMILY RNI-like 264 420 - -
Tpr7g1262 887 Pfam Protein tyrosine and serine/threonine kinase 759 868 IPR001245 GO:0004672|GO:0006468
Tpr7g1262 887 Gene3D Ribonuclease Inhibitor 32 189 IPR032675 -
Tpr7g1262 887 Gene3D Ribonuclease Inhibitor 190 284 IPR032675 -
Tpr7g1262 887 SUPERFAMILY L domain-like 35 312 - -
Tpr7g1262 887 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 128 872 - -
Tpr7g1262 887 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 12 288 - -
Tpr7g1262 887 Gene3D Ribonuclease Inhibitor 387 691 IPR032675 -
Tpr7g1262 887 SUPERFAMILY Protein kinase-like (PK-like) 736 873 IPR011009 -
Tpr7g1262 887 Gene3D Phosphorylase Kinase; domain 1 738 830 - -
Tpr7g1262 887 ProSiteProfiles Protein kinase domain profile. 755 887 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g1262 887 Gene3D Transferase(Phosphotransferase) domain 1 831 876 - -
Tpr7g1262 887 Gene3D Ribonuclease Inhibitor 285 386 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1262 Tpr-Chr7 13204294 13265997 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1262 34 872 Receptor kinase-like Gene Family AT3G47570 34.650 2.59e-138 436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Tpr7g1262 PK_Tyr_Ser-Thr 1.2e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1262 - - mtr:MTR_8g465340 1023.08