Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1244 ATGTTTCACACTCCGTTTCGTTTACTTAATTTTCCCTGCACAAAACCTCCACATCTAAACATTCATATCTTGCTTTCCCTTCGTTCACCAACCATCCTTTGCTCATTCAATGAAGATTCCTTTTCTATCCCTAAATCAACCCAGTTTGGTTACAGTCCTCCAGAGGATCTATTTGGGCTAGAGGTGGAACTCAAACCAAGGAAAACTAACTCTCATATAAGAGAACCAAGGTCTTGGTTTGGTCCAAATGGACAGTATATCAGAGAGCTACCTTGTCCAAGTTGCCGAGGAAGGGGTTATACTCCTTGTACAGAATGTGGAATAGAAAGATCTAGATCAGACTGTCCAGAATGTAATGGAAAGGGTTTACTGACTTGCCACCAGTGCTCTGGAGATTGTGTCATATGGGAAGAATCAATTGATGAACGACCATGGGAGAGAGCTCAATCAATATCTCCACTCAAAGTGAAGGAAGACGATGAAGTTGACAAATTAGACATAAAGCTTGATGCAAAGAAAAAATCCAAGCGTGTTTACCAGTCACCTTCTCCTGAAGTTGGATTAAAGATTAGTCGTTCATTAAAAAGTCTCAATGCCAAAACTGGTCTATTTAGCAAACGAATGAAGATCATCCACCAGGATCCAATTCTTCAGGCACAGAGAGTGATTGCTATTAAGAAAGCTAAGAGAACTGTTTCAGCAAGAATGCATGCTTCCAAAACTATGAAAGAGTTCTTTAGTGATCCAATAAACCGTCAAAAAAGGAGCATAGCCATGAAAGGAGTGAAATTCTACTGCCAAAACTGTGGACGTGAAGGACATAGGAGACACTATTGTCCAGAACTCAAGGATGGTTTGGTTGATCGGAGATTCACATGTAAGCTATGTGGTGAAAAAGGGCACAACCGAAGGACATGCATTAAGTTAAGGATAAGCCATAGTGATGGGAGAGTTATAAAACACCATCGATGTAAAATATGTCGACAATATGGCCATAACAGAAGGACATGCCCTCAAGTTATTTCGAATAAAGGAACGGACACAACATCTCAAAGAATATACAAATGTCGATTGTGCCAGAAAGAGGGACACAATATTAGAACATGTCCTAGAAGAATAGTTGGTACTGAAAATTCTCAAAAGTAA 1146 0.3979 MFHTPFRLLNFPCTKPPHLNIHILLSLRSPTILCSFNEDSFSIPKSTQFGYSPPEDLFGLEVELKPRKTNSHIREPRSWFGPNGQYIRELPCPSCRGRGYTPCTECGIERSRSDCPECNGKGLLTCHQCSGDCVIWEESIDERPWERAQSISPLKVKEDDEVDKLDIKLDAKKKSKRVYQSPSPEVGLKISRSLKSLNAKTGLFSKRMKIIHQDPILQAQRVIAIKKAKRTVSARMHASKTMKEFFSDPINRQKRSIAMKGVKFYCQNCGREGHRRHYCPELKDGLVDRRFTCKLCGEKGHNRRTCIKLRISHSDGRVIKHHRCKICRQYGHNRRTCPQVISNKGTDTTSQRIYKCRLCQKEGHNIRTCPRRIVGTENSQK* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1244 381 Gene3D - 319 378 - -
Tpr7g1244 381 PANTHER ZINC FINGER CCHC DOMAIN CONTAINING PROTEIN 44 373 - -
Tpr7g1244 381 Gene3D - 262 309 - -
Tpr7g1244 381 ProSiteProfiles Zinc finger CCHC-type profile. 266 281 IPR001878 GO:0003676|GO:0008270
Tpr7g1244 381 PANTHER ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEIN 44 373 - -
Tpr7g1244 381 SUPERFAMILY Retrovirus zinc finger-like domains 263 308 IPR036875 GO:0003676|GO:0008270
Tpr7g1244 381 SUPERFAMILY Retrovirus zinc finger-like domains 317 372 IPR036875 GO:0003676|GO:0008270
Tpr7g1244 381 SMART c2hcfinal6 323 339 IPR001878 GO:0003676|GO:0008270
Tpr7g1244 381 SMART c2hcfinal6 355 371 IPR001878 GO:0003676|GO:0008270
Tpr7g1244 381 SMART c2hcfinal6 292 308 IPR001878 GO:0003676|GO:0008270
Tpr7g1244 381 SMART c2hcfinal6 265 281 IPR001878 GO:0003676|GO:0008270
Tpr7g1244 381 Pfam Zinc knuckle 354 370 IPR025829 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1244 Tpr-Chr7 12904734 12910981 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1244 48 379 C2H2 Transcription Factor Family AT5G20220 63.824 6.59e-158 448
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1244 - - cam:101493936 605.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g1244 7 12904734 12910981 Tpr7g1244 7 12904734 12910981 ECH