Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1238 ATGATGGATGTGAAGAAGGAGAAGGAACAGGGCAATGTAGAATCGTCTAAGAAGAAGGGGCGTCGTCTTGTGACTTGGACTCAAGAGGAGGATGAGATACTAAGAGAACAGATTGGAATTCATGGAACTGAAAATTGGGTAATTATTGCATCCAAATTCAAGGACAAAACAACAAGACAGTGCAGAAGAAGATGGTACACATATTTGAATTCTAATTTCAAGAAAGGTGGATGGACACCAGAGGAAGACATGCTCTTATGTGAGGCTCAAAAAGTATTTGGGAACAAATGGACAGAAATAGCAAAGGTGGTTTCAGGCAGAACGGATAATGCTGTAAAAAATCGATTCTCCATACTCCGCAAGAAGAGAGAAAAATCTGCAGCATTAGAAAAAGAGAACATCATTCCATACATTGATTCCAATAGCAAGAGGAATATTTCTCATCAAGGTTATATTACAAATGCAACTTCAGAATCTGCTATGCCAGTTAAAAAAATGAGGAGGGCCCATATTCCTGATGATGCAAACAAGATCAACTTTGGAGACAGATCACATTTGCGAAATGCAGCTTCAACAAATCAGCAGCCAAGGGCACCATTTTCCGAATTAGCTAAAAAATCGAATTGTGTGAACAATCTTCCAGACAGGCATCATATTTTCAATGACAAGTTCAACAGTTCTGGCCAAAATAACAAAAATCAGCTCAAAACAGATGATCCAAAGATAAGTGCATTGATTCAAATAATTGATTCAGAGAACATGGAAAATTTATGGAAGCCACTTCTAGAGTTTCTGAACCGAACAGATATCATTGGAGAAAAAATTGAAGTTTTACAGCTTGTAAGTCGTATGGTCAAGGACTTGAAGAGTAGTAGTAATGAGAGAGGCCATTCCGGCTTGAGGCAAATGGAACTAGACGAAGATTCTCCAGGAAGTTCTGAACACAGTTCAGGATCAACTCTGCTGACCAAGTCCACTGGTACTGGTGATAATTTGGAAAACTCATTGAATCAGGATATTGGAACTGAAATGAAAGCTACACAATTTGAAGTTAAAAAAGAAGAGTCTGAAGGTGTGGAAGATATTGGAACTGAAATGAAAGCTACACAATTTGAAGTTAAAAAAGAAGAGCCTGAAGGTGTGGAAGATATTGGAACTGAAATGAAAGCTACACAATTTGAAGTTAAAAAAGAAGAGTCTGAAGGCGTGGAAGGAGTTCTTTCTACTGGAAAAGTGGAACAAGATATGATGCCACACGGTGAGGAACAGATAAATGCATCGTTAAGAATGGAGTGTTCCCCTCTTCAAGTTACCCCTATTTTCAGATCCTTGGCTGAAGAAATTCCCAGCCCAGAATTTTCAGAAAGTGAAAAGAGCTTTCTGAGGAAAGCACTGGGAGTAGAGTCTCCATCTATCAATACAACTTTCAGTCCGTTCAAATTGCCACCATGCAATTGTCAAAAAAAAAAATTGCCACCATGCAAAAGATCCCTTCAATATGATACATGA 1509 0.385 MMDVKKEKEQGNVESSKKKGRRLVTWTQEEDEILREQIGIHGTENWVIIASKFKDKTTRQCRRRWYTYLNSNFKKGGWTPEEDMLLCEAQKVFGNKWTEIAKVVSGRTDNAVKNRFSILRKKREKSAALEKENIIPYIDSNSKRNISHQGYITNATSESAMPVKKMRRAHIPDDANKINFGDRSHLRNAASTNQQPRAPFSELAKKSNCVNNLPDRHHIFNDKFNSSGQNNKNQLKTDDPKISALIQIIDSENMENLWKPLLEFLNRTDIIGEKIEVLQLVSRMVKDLKSSSNERGHSGLRQMELDEDSPGSSEHSSGSTLLTKSTGTGDNLENSLNQDIGTEMKATQFEVKKEESEGVEDIGTEMKATQFEVKKEEPEGVEDIGTEMKATQFEVKKEESEGVEGVLSTGKVEQDMMPHGEEQINASLRMECSPLQVTPIFRSLAEEIPSPEFSESEKSFLRKALGVESPSINTTFSPFKLPPCNCQKKKLPPCKRSLQYDT* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1238 502 PANTHER MYB PROTEIN-RELATED 283 335 - -
Tpr7g1238 502 PANTHER MYB PROTEIN-RELATED 5 248 - -
Tpr7g1238 502 PANTHER MYB PROTEIN-RELATED 411 485 - -
Tpr7g1238 502 SMART sant 74 122 IPR001005 -
Tpr7g1238 502 SMART sant 22 71 IPR001005 -
Tpr7g1238 502 PANTHER TRANSCRIPTION FACTOR MYB88 411 485 - -
Tpr7g1238 502 PANTHER TRANSCRIPTION FACTOR MYB88 283 335 - -
Tpr7g1238 502 PANTHER TRANSCRIPTION FACTOR MYB88 5 248 - -
Tpr7g1238 502 SUPERFAMILY Homeodomain-like 22 116 IPR009057 -
Tpr7g1238 502 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 70 124 IPR017930 -
Tpr7g1238 502 CDD SANT 25 69 IPR001005 -
Tpr7g1238 502 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 18 69 IPR017930 -
Tpr7g1238 502 ProSiteProfiles Myb-like domain profile. 70 120 IPR001005 -
Tpr7g1238 502 Gene3D - 24 71 - -
Tpr7g1238 502 Pfam Myb-like DNA-binding domain 26 86 - -
Tpr7g1238 502 MobiDBLite consensus disorder prediction 289 311 - -
Tpr7g1238 502 Gene3D - 77 148 - -
Tpr7g1238 502 MobiDBLite consensus disorder prediction 289 336 - -
Tpr7g1238 502 ProSiteProfiles Myb-like domain profile. 18 69 IPR001005 -
Tpr7g1238 502 CDD SANT 78 116 IPR001005 -
Tpr7g1238 502 MobiDBLite consensus disorder prediction 312 336 - -
Tpr7g1238 502 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1238 Tpr-Chr7 12815563 12824198 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1238 14 301 MYB Transcription Factor Family AT2G02820 49.682 2.99e-89 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Tpr7g1238 Myb_DNA-bind_6 3.4e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1238 K09422 - gmx:100807667 451.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g1238 7 12815563 12824198 Tpr7g1238 7 12815563 12824198 ECH