Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1223 ATGGATAATGAGTGTGTGGAAAATTCCACTGTGGAGTGTTTAGAAGACCATGAGATAGTTGATGATGTGTCTAATGATTTAGAACCAAATTCAGAAAATTCCAAGTCGCCTGAAGCTAATATTTGTCCTATTGTTGATATGGAATTTGCCTCCATTGCGGATGTAAAAGAATTCTACACATCATTTGCCAAGAAAGAAGGTTTTGGAGTTCGTGTTCGATCTACTAAGCAAAATTTTTGCATGTTTGTATGCGCTAATGAAGGTACACATATAGTGAAGGGTGAAAATGAAGAAGGGAAGAGAAAGCGTTCAACCTCAAGAACTGATTGTAAAGCATCACTTACTGTTTCAAAAGCAGGGAAGAGAAGTAAATGGGTTATAAAAAGCATAAACAATGTTCACAATCATGGAATGGTTAGTCCTAAGAGTGTGGCCTATCTGCGGTCTCATAAGAAAATGACTGCAGCAACTAAAAGCCTCGTTGAGAAGTTTGATGAAGAAGGAGTACCTACAGGGAAAGTTGCTACAATGTTTCAGGGTGAAGATAATGCTTTTTCTAGTCGGGATTGCTGGAATCATCTTAGAAATCTCAGAAGAAGAAATCTTGATGTTGGAGATGCTCAAGCTGTCTTTAAATTTTGCAAGAAAAAACAAGTTGAGAATCCCAATTTTTTTTATGCAATACAATGTGATGATGAAGATAGAATGATAAATTTCTTCTGGGTGGATGGAAGAGCAAGATTGGCATATCAATTTTTTGGTGATGTTATTACATTTGATACAACATATAAAACCAACAAGTATGATATGCCATTTGCACCCTTCACCGGATTGAATCATCATTTTCAATCTATCTTATTTGGATGTGCTTTGTTGCAAGATGAGACTCAGAGGTCGTTTGAGTGGTTGTTTAGAACATGGCTAGATGCAATGGGTGGTAAATATCCAGTGTCAATAATAACAGATCAAGACTTGGCAATGAAGGCTGCCATAGCCAATGTTTTCCCACATACTCGTCACCGGTTATGTTTATGGCACATAAAAAAAAAATTTGCTGAGAAGCTTTCCCACATATACCACAAAAATTCAACTTTCAAGCGTAAATTGAAATCTTGTATTCGTGATTCGCCATCTATAAAATACTTTGAAGAAGAATGGGAACGTATAATGATTGATTATAATTTGAAGGAGAATGAATGGCTTAAAGGGTTGTACGATATAAGAAAATCTTGGATTCCTGTTTTCAACAGAAGCACTTTTTTTGCCGGCATGAACACTACACAAAGGAGTGAGAGTATTAATGCCTTTTTTGATTCTTTTGTTAATTCTTCAACAACACTACAAGGTTTTGTAGTTAAATTTGACAAGGCAATGGATAGTCGCTATGAAAAACAAAGAAGAGAGGATTTTGAATCAAGGCATCGATTGCGACTCGTAGTTGTTAAGTCAAAAATTGAGGAGCATGCAGCATCAATATATACAAGAAACATTTTTGGGAAGTTTCACGATGAGTTTATAAAGATTATTCAATTTAGGAGGGAAAAACTTGAAAAAGAAGGGTCTCAGAATAGATATAAGGTATCTAATGATTATGATTCGAAAGACACATTCATAGTTTGCATATCTTGGTGA 1632 0.3548 MDNECVENSTVECLEDHEIVDDVSNDLEPNSENSKSPEANICPIVDMEFASIADVKEFYTSFAKKEGFGVRVRSTKQNFCMFVCANEGTHIVKGENEEGKRKRSTSRTDCKASLTVSKAGKRSKWVIKSINNVHNHGMVSPKSVAYLRSHKKMTAATKSLVEKFDEEGVPTGKVATMFQGEDNAFSSRDCWNHLRNLRRRNLDVGDAQAVFKFCKKKQVENPNFFYAIQCDDEDRMINFFWVDGRARLAYQFFGDVITFDTTYKTNKYDMPFAPFTGLNHHFQSILFGCALLQDETQRSFEWLFRTWLDAMGGKYPVSIITDQDLAMKAAIANVFPHTRHRLCLWHIKKKFAEKLSHIYHKNSTFKRKLKSCIRDSPSIKYFEEEWERIMIDYNLKENEWLKGLYDIRKSWIPVFNRSTFFAGMNTTQRSESINAFFDSFVNSSTTLQGFVVKFDKAMDSRYEKQRREDFESRHRLRLVVVKSKIEEHAASIYTRNIFGKFHDEFIKIIQFRREKLEKEGSQNRYKVSNDYDSKDTFIVCISW* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1223 543 Pfam MULE transposase domain 256 350 IPR018289 -
Tpr7g1223 543 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 34 539 IPR031052 GO:0006355
Tpr7g1223 543 Pfam FAR1 DNA-binding domain 57 139 IPR004330 -
Tpr7g1223 543 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 34 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1223 Tpr-Chr7 12610963 12613265 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr7g1223 MULE 6.5e-32 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1223 - - qlo:115970754 659.448