Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1210 ATGATGGATGGGCGGCGTCATTCTGTTGATATACCGATTTCTAAGACTCTTGTAGCATTGAGGAGAGTGAGGTCATTGAGGGATCCATCAACTAATTCTATGACCAAACATTCTCCTTTGATTGATAATTTACATTGGGAAAATAGTTCCGGCAATGGGATTACTCTGATGTTTCCTGATGATGTTCATGCTTTTGATTCTGATGATAACCTTGCCTTCAGATCAAGGAATTTATGTTTTAAGGGTCAAAGAGAGCTGAATGCTGCTGGTTTTGAATCGAATCATGGTATGTTGAAATCAAGGCTGAATCAACAAAGTGTTTACGGAAATAAATCACCTAATGAAAGCTGTGGTAGCAACCATGGTGGTAGAGGATTGGATATTAACGATTTAGAGGATGAGGAATTGTGCTATAGAAAAACTGGAAGATTGTCAAAATTAGGGAGAATAGATCATATTAAGTCGGCCAAAAAGCCGTTATGCAAGAATCAAGTTAAACCGTCTCTTGTAGTGGGAGATATCGCTAGCCATTTGAGTAGTCCATGTCTTTCTCCTCGTGATGCTTTATCGCCCAATGGTTCCTCAGAGCATACAAATCAAGATTTTGGTGTTCTAAATAATACCAATAATGCATGTGGAATAAGCTGTTGTTGGTCAAAATCACCAAGATTTATAGAATCAAATCTTTATTGTGAGAAAGAAGACCGTCCCTTGATATTAAATGGCGCTGATGACACGAATCTTCACGGACATAGAAATGCGAGACACAATTGTGGTGAAATTAGTCCAAATTTGGAAACTCCTCGAATGTTATCCATGAAATTCAGGCCTAAATCATTTGGTGATTTGGTGGGACAAGATGTGGTAGTTAGGTCTCTTTTGAATGCAATCTCTATTGGAAGGATAACATCATTTTATCTCTTCCATGGTCCACGTGGTACCGGCAAGACATCTGCTTCTAGGATATTTGCTTCTGCTCTGAACTGCCTCTCTGTTGAGGAGCAAAGACCATGTGGCTTGTGTAGAGAATGTGCTTTATATTTTTCTGGAAGAAGTAAAGATGTTAAGGTGGTGGATTCTGTGAGAATCAATCATACAGACCAGGTCAAATCCCTCGTCAAGAATGCGTGTACACCTCCGGTTTCCTCACGTTTTAAGGTTTTCATTATTGATGAGTGCCAGTTATTGAACGAGGAGACGTGGGCGTGCCTTTCGAATAACCTAGAGTACATTTCTCAACACGCGGTCTTTGTGATGATCACTCCTGATTTGGATAAGCTTCCTCAAAGTGCAGTTTCCCGGGCACAAAGGTATTACTTTCAGAAGGTTAAAGACACTGATATTGCACGCAGATTAGAAACAATTTGTGCAGAAGAAGGTCTTGATTATGAACAAGATGCTTTGGACCTTATTGCCGCAAAATCCTGTGGTTCTGTTAGGGATGCAGAAATTATGCTTGATCAGCTGAGTTTGCTTGGTAAAAAGATCAAAATTTCCTTTGTTTACGAGCTTACTGGGATTGTTTCTGATGCTGAATTGCTTGATTTGCTGGATCTGGCGATGTCCCCAGACACTACAAATACAGTTATAAGAGCTCGTGAGCTGATGAGATCGAGGATAGATCCTTTGCAACTTGTGTCACAGTTGGCAAATCTCATAATGGACATCCTTGCGGGGAAATGTGATTATGAAGCCAGAAGTAGACTTTTTAGTAGATATACCTCGGAAGCAGACCTTCAGAAACTAAGTCATGCATTGAGAATACTTTCTGAAGCTGAGAAACAATTACGAATTTCAAAAAATCAAACAACATGGTTCACCGTAGCTCTTCTACAGTTAAGCTCTATCGATTATCCTTCAACCGATGCAGATGGTTCCAAGTCGTTTCTGAGAAGTGCATGCAATGGAGGGCAGAGCATGGAACATCTTGCTACAGCTACAGGTGGATGTGAAAACAAGTCATTTAGATTAGTGGCGCACGAGGATCACGAAGGAACACTGGATTCCATATGGTATAAAGCTACTGGGATATGTCAATCTAGTCAACTCAAAACTTTTCTCAGGAAGAAGGGAAAGTTGTCTTCGCTTCATGTTGATCAATCTACATCTTGTCTTGCTATAGCGGAGTTGGAATTCGGTAATCGCCGTCATGTATCCAAGGCTGAGAAGTCATGGAAATTGATTGCAAGTTCCTTGCAAAGCATATTGGGTTGTAACATTGAGCTGAGAATCACTTATGTACCTCATACTTCTAATTCACCGAAGAGGTTATCTTTCAACAACATCTTTAGTTGTTCACGCAAAATACAACAGAAACCATTGTCGTCCAATGATCAAGAAAGTGAAATAGACTATGCTTATTACAATTCTGAAAATCCCATGATGAAGAATAAAACTCTATCTTCTTCTGCTGAATGTGGATCTCGGGTGCGACCATCGAAGTCTTACAACGGAATGGATGTTGTAACAACACTGAGGAGTTGTGAAGGGAACGTGCTGAGCTCAAGAGAAAGATTTTTGAATCGGTTTCTTCAAGAGAATATGGGAGCATCATGTTCTAGAGTTGATGCTTACAATGAAGAGGGACACATTGGTGCACATTTAGTTCCACCAATCATCAACTCGGATAACCAGTCTAACTGTTTTCCTCGAACTCTCTGGCTTCAAAAGAAGTTCCGATCATCAAATTCATCCAAGTTGTCTTTTCAGGGTATCTAA 2718 0.4014 MMDGRRHSVDIPISKTLVALRRVRSLRDPSTNSMTKHSPLIDNLHWENSSGNGITLMFPDDVHAFDSDDNLAFRSRNLCFKGQRELNAAGFESNHGMLKSRLNQQSVYGNKSPNESCGSNHGGRGLDINDLEDEELCYRKTGRLSKLGRIDHIKSAKKPLCKNQVKPSLVVGDIASHLSSPCLSPRDALSPNGSSEHTNQDFGVLNNTNNACGISCCWSKSPRFIESNLYCEKEDRPLILNGADDTNLHGHRNARHNCGEISPNLETPRMLSMKFRPKSFGDLVGQDVVVRSLLNAISIGRITSFYLFHGPRGTGKTSASRIFASALNCLSVEEQRPCGLCRECALYFSGRSKDVKVVDSVRINHTDQVKSLVKNACTPPVSSRFKVFIIDECQLLNEETWACLSNNLEYISQHAVFVMITPDLDKLPQSAVSRAQRYYFQKVKDTDIARRLETICAEEGLDYEQDALDLIAAKSCGSVRDAEIMLDQLSLLGKKIKISFVYELTGIVSDAELLDLLDLAMSPDTTNTVIRARELMRSRIDPLQLVSQLANLIMDILAGKCDYEARSRLFSRYTSEADLQKLSHALRILSEAEKQLRISKNQTTWFTVALLQLSSIDYPSTDADGSKSFLRSACNGGQSMEHLATATGGCENKSFRLVAHEDHEGTLDSIWYKATGICQSSQLKTFLRKKGKLSSLHVDQSTSCLAIAELEFGNRRHVSKAEKSWKLIASSLQSILGCNIELRITYVPHTSNSPKRLSFNNIFSCSRKIQQKPLSSNDQESEIDYAYYNSENPMMKNKTLSSSAECGSRVRPSKSYNGMDVVTTLRSCEGNVLSSRERFLNRFLQENMGASCSRVDAYNEEGHIGAHLVPPIINSDNQSNCFPRTLWLQKKFRSSNSSKLSFQGI* 906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1210 905 Gene3D - 444 506 - -
Tpr7g1210 905 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 270 492 IPR027417 -
Tpr7g1210 905 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 100 881 - -
Tpr7g1210 905 TIGRFAM dnaX_nterm: DNA polymerase III, subunit gamma and tau 270 613 IPR012763 GO:0003887|GO:0005524|GO:0006260|GO:0009360
Tpr7g1210 905 CDD HLD_clamp_pol_III_gamma_tau 443 506 IPR045085 -
Tpr7g1210 905 SUPERFAMILY post-AAA+ oligomerization domain-like 507 614 IPR008921 GO:0003677|GO:0006260
Tpr7g1210 905 CDD AAA 284 434 - -
Tpr7g1210 905 Gene3D - 507 617 - -
Tpr7g1210 905 Gene3D - 263 441 IPR027417 -
Tpr7g1210 905 Pfam DNA polymerase III, delta subunit 286 443 - -
Tpr7g1210 905 PANTHER DNA POLYMERASE III SUBUNIT GAMMA/TAU 100 881 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1210 Tpr-Chr7 12371364 12376501 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1210 261 508 Core DNA Replication Machinery Family AT1G21690 26.984 1.44e-15 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1210 - - gmx:100819111 1189.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g1210 7 12371364 12376501 Tpr7g1210 7 12371364 12376501 ECH