Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1204 ATGGCCCTTTCTGAATCAAACGCTGACGTATTCCCATGGCTGAAATCCATGCCAGTAGCCCCCGAATACCGACCTACTCCAGCAGAGTTCGAAGATCCGATCGGTTACATTTTCAAGATCGAAAAAGAAGCTTCCAAATACGGAATCTGTAAAATCATTCCACCGTTTCCACCCTCACCTAAGAAAACCGCCATAGCTAACCTAAACAGGTCACTACCTAATTCCACATTCACTACACGTCAGCAACAGATCGGGTTCTGTCCCCGTAAGTCCCGACCCGTTAAACGACCCGTTTGGCAGAGTGGGGACCACTACACCTTTACGGAGTTTGAAGCAAAAGCTAAATGGTTTGAGAAAAGTTACCTGAAGAAGCATAGCAAGAAGAAGGGTAATGGTGGTGGTGCTCTTGAAATGGAAACACTGTTTTGGAAAGCGACGGTTGATAAACCTTTTTCAGTTGAATATGCAAATGATATGCCTGGTTCCGCTTTTTCGATGTCGTCGTCGAAATTTCGTCACTCCGGTGAGTCTGCTTCGGTTGCTCATAGTGCTTGGAACATGAGAGGGGTTTCAAGGGCAAAAGGGTCTTTGTTGAGGTTTATGAAGGAGGAGATTCCTGGGGTTACTTCACCCATGGTTTATCTTGCTATGCTTTTTAGTTGGTTTGCTTGGCATGTTGAAGATCACGATCTTCATAGCTTGAATTATCTTCATATGGGTGCTTCCAAGACTTGGTACGGTGTTCCTAGAGATGCTGCTGTTGCTTTTGAGGATGTTGTTAGGGTTCATGGCTATGGTGGAGAGATTAACCCTCTTGTTACATTTTCTATTCTTGGTGAGAAAACCACAGTGATGTCACCAGAAGTGTTTATTAGTGCAGGTGTTCCATGCTGCAGGTTAGTGCAAAATGCTGGAGAATTTGTTGTGACATTTCCAAGAGCCTATCACACAGGGTTTAGTCATGGTTTTAATTGTGGAGAGGCAGCAAACATTGCAACACCTGAGTGGTTGAGGGTTGCCAAGGATGCTGCTATTCGGAGGGCTTCAATAAATTATCCTCCCATGGTTTCACATTTCCAGTTACTTTATGACCTTGCCTTAGCTTTGTGTTCAAGAGTCCCTGGGGGAATCAGTGCGGGACCACGGAGTTCTCGTCTTAAAGATAAGAAGAAGGGTGAAGGAGACTCTGTAGTTAAAGAACTATTTGTCCAGGATGTGTTACGAAACAATGATCTGCTTCATGTACTTGGAAAAGAATCTTCTGTAGTACTTCTTCCTCGCAGTTCAGTTGACATTTCTATTTGCTCAAAATTACGTGTTGGATGTCGGCAACAAAAAGTGAACCCTGGATTTTCCATTAATGTATGCAATTCTGAGGGAATGAATTCCTCAAAAGGTTTTGTTTCTGATGATCTGGTATTCAACAGGAATTGTGGAATCGTTCAAGAAAAAAATTCTCATTCTGTGAAAGGCGAGTTTAATCTGTTGTCCGAAGGGAAGGGGATTTCCCCATTTGATGCAAACAGTAACACATCCCCTTCAAGTTCCAAGCAGCTTCATAGAAGCAAGGAAAGTGAAACTAGTCAAGGAGATGGATTGTCAGATCAGAGACTGTTTTCGTGTGTCACGTGTGGGCTATTAAACTTTTCATGTGTTGCTATTGTACGTCCTAGCGAACCAGCAGCAAGATATCTTATGTCTGCTAACTGTAGCTTCTTTAATGATTGGGTTGTTGGTTCTGGAGTACCTAGCAATAAATTTACTGTTGCCGGTGAAGATGAAAATATTCCTGAGCCAAATATTCATACAGAGTGGACAGAGAAAAATGCCCAAGTAGAGGCTTTAAATACTGAAGGAGGAAATGCTAATACAGCTCTTGCATTATTAGCTTCAGCATATGGAAATTCTTCCGACTCTGAGGAAGATGCAGTTGACAATCATGAATCAAATACAATACACTCTACATCAGAAAGTTTGCCTTCTAATGTTCAGGTTTCCCATGATAATCCTATGACTAGGCATGATAAAGATGATATTCTTTCAGAGAGTACTAGTTACAAAGCACATGGGTTTGAGGGTAATTTGAGTCAGCCTTGTGACCAATCTTTGGAGGATCAGGATTATAAAACCACTTCAGGAGTTGCATTGGAAAATACAAGGCAAATGCCTTATTCCACCACATATAGTTCCCAAGATGCTAATAATGCTGAAAAATCACTGTCAGTTGAAGCCATGGTTGCTGTCAATCATAAAAATGCTTTATTGGTACCGCAATGTGACGAAGACTCATCTAGAATGCATGTATTCTGTCTAGAGCATGCTGTAGATGCAGAACAGCAACTTCGCCCAATAGGTGGAGCCCACATATTGCTCTTGTGCCATCCAGATTATCCCAAGATAGAGGCTGAAGCAAAGTTGGTGGCAGAAGATTTGGGGATTGATTACATGTGGAAGAATATTACCTACAGGCATGGCACCAAAGAGGATGAGGAGAGGATCCAGTTAGCTGTGGATAGCGAGGAAGCGATTCCTGGGAATGGGGACTGGGCTGTAAAGCTAGGAATAAATCTCTTTTATAGTGCAAATCTTAGCCGCTCTCCCCTTTATAGCAAGCAGATGCCTTACAATTCTGTTATATATTATGCATTTGGTCGTAGCACTCAAGCAAGCTCGCCCATAGAACCAAAGGTCTATCAGAGAAGGTCCGACAAGCATAAAAAGGTAGTTGCTGGCAAATGGTGCGGTAAAGTTTGGATGTCTAATCAGGTCCATCCCCTTTTAGCAAAAAGGGATTCTGAAGATGTTGAGGATGAGAAAAGTTTACATGGATTGGTATTGCCTAATGTGAAAATTGAGGCATCTGGAAGTACCCCCAAAACTGAAACTGCTATTACAAAATCAGGTAGGAAAAGGAAAACGACCATAGGCAGTAGACGAACCAGGAGAGGAGGATTTGTTAAAAAAGACGTGGTTTTAGATAATTCCGCTGAAGATAAACCCAATCCTCGGCCAAGGAGGATTGTTAAACAAGATGGTGCAGCTGAAAGTGATTTAGTTTCTGATGATTCGCTTGATGATGATTATCGCATGCGACGTATGAGTTTTAATGTCAAAAAAGCTAAATTTATTGACAATGATGCGGTTTCAGATGATGCAATGGACCTTGATTCTGATTGTCATCAGATGGGAGAACTTAGAAGCAAGCAAGTTGAATATACAGAGAGAGACTCAATTTCAGAGGATTCTTTGGATGTTGGTTCACTTCAACACAGAAAGACTTCTAGAAACAAGCATGCCAACTGCATAATTGAAGATGCAATTTCTGATGACCAAATGGAGAATGGTTGTCAGATGCAGCAAAATAGAATTCCTAAAAAAAGGCAAGGCAAATCCCTTGCTGAAAAAGATTCCGTGATATCAGATGACCAACTGGAGCTGAACATGCAGAAGCAGTGGCGGAGTAATTCTAGAAGTAGGAAAGCCAAATACCTCACCGAAGAGGATAGTGTATCAGATAACCAAGCGAATGTCTATTGTCGCAAGTACCAAAGAAGGACAGTCAAAGTCAGGCAAGCCAGATGTGTAGTAGGGGAAGATTTAATGTCTGATGACCAATTGAAGGATCCCTTTCTAAACCAGAAACCAAGTATTTCTAGAAGGAAAAACAAAGTCATTGATAGAGAAGTTAAAAATGAAATGTCTGATGACCAACTGGATGATCACTTTCAGAAGCAGCAGAAAAAAATTCCTAAGGGCAGGAGGCACACCAAACAGACTGATGAAGAAGTTATTGATGACTCGGCTGAAGATGATATGAGTTTAAATAACGAAATGGAAGATGATTCTCTTCAGCAGTACAAGAGAACTCATCCAACTAAACAATCCAAACCAAAGACACTTAGACAAATGAAGCAATCCAAATCCCTCCAGATAAAAAACCAGACACTTCCGGTGAAACGAGGGGTTGGGTTGCGGATGAAATCAAAGGCTGCTCAGCAAGTAAAGCAGCCTTCTCGTTTGCGGAGTAAACAATCTGGTAGCTCCAGAGAGCCTAGTTTAGATATGGAAGAGGAGGAAGAAGGTGGACCTAGCACACGCCTTAGAAAGAGGGTCCAAAAAGCTCAGGAGTCTGAAGTAAAATCAACAGAAAAGCAAACCAAAAGGAAAAGTGCAAAGGATGTTACAGCTACAAAGGTTTCAGCTCGCGATCCCAAAACAGAGGACGAGGAAGCAGAACATCAGTGTGACATTGAGGGATGCACCATGAGTTTTGAATCAAAACAAGAATTGTTGCACCATAAGAGAAATGTCTGTCCAGTAAAAGGTTGCGGAAAAAAGTTTTTCTCACACAAATATCTGGTGCAGCACCGGCGAGTTCATGAAGATGACCGTCCCCTGAAATGTCCCTGGAAGGGGTGCAAGATGTCTTTCAAGTGGGCATGGGCTCGAACTGAGCATATTCGAGTGCACACTGGTGTACGTCCTTATGCGTGTGCCGAACCAGGTTGTGGGCAAACATTCAGATTTGTGTCTGATTTCAGTCGTCATAAGCGAAAGACTGGGCATTTAGCAAAGAAGATTCGTCAATAG 4590 0.4218 MALSESNADVFPWLKSMPVAPEYRPTPAEFEDPIGYIFKIEKEASKYGICKIIPPFPPSPKKTAIANLNRSLPNSTFTTRQQQIGFCPRKSRPVKRPVWQSGDHYTFTEFEAKAKWFEKSYLKKHSKKKGNGGGALEMETLFWKATVDKPFSVEYANDMPGSAFSMSSSKFRHSGESASVAHSAWNMRGVSRAKGSLLRFMKEEIPGVTSPMVYLAMLFSWFAWHVEDHDLHSLNYLHMGASKTWYGVPRDAAVAFEDVVRVHGYGGEINPLVTFSILGEKTTVMSPEVFISAGVPCCRLVQNAGEFVVTFPRAYHTGFSHGFNCGEAANIATPEWLRVAKDAAIRRASINYPPMVSHFQLLYDLALALCSRVPGGISAGPRSSRLKDKKKGEGDSVVKELFVQDVLRNNDLLHVLGKESSVVLLPRSSVDISICSKLRVGCRQQKVNPGFSINVCNSEGMNSSKGFVSDDLVFNRNCGIVQEKNSHSVKGEFNLLSEGKGISPFDANSNTSPSSSKQLHRSKESETSQGDGLSDQRLFSCVTCGLLNFSCVAIVRPSEPAARYLMSANCSFFNDWVVGSGVPSNKFTVAGEDENIPEPNIHTEWTEKNAQVEALNTEGGNANTALALLASAYGNSSDSEEDAVDNHESNTIHSTSESLPSNVQVSHDNPMTRHDKDDILSESTSYKAHGFEGNLSQPCDQSLEDQDYKTTSGVALENTRQMPYSTTYSSQDANNAEKSLSVEAMVAVNHKNALLVPQCDEDSSRMHVFCLEHAVDAEQQLRPIGGAHILLLCHPDYPKIEAEAKLVAEDLGIDYMWKNITYRHGTKEDEERIQLAVDSEEAIPGNGDWAVKLGINLFYSANLSRSPLYSKQMPYNSVIYYAFGRSTQASSPIEPKVYQRRSDKHKKVVAGKWCGKVWMSNQVHPLLAKRDSEDVEDEKSLHGLVLPNVKIEASGSTPKTETAITKSGRKRKTTIGSRRTRRGGFVKKDVVLDNSAEDKPNPRPRRIVKQDGAAESDLVSDDSLDDDYRMRRMSFNVKKAKFIDNDAVSDDAMDLDSDCHQMGELRSKQVEYTERDSISEDSLDVGSLQHRKTSRNKHANCIIEDAISDDQMENGCQMQQNRIPKKRQGKSLAEKDSVISDDQLELNMQKQWRSNSRSRKAKYLTEEDSVSDNQANVYCRKYQRRTVKVRQARCVVGEDLMSDDQLKDPFLNQKPSISRRKNKVIDREVKNEMSDDQLDDHFQKQQKKIPKGRRHTKQTDEEVIDDSAEDDMSLNNEMEDDSLQQYKRTHPTKQSKPKTLRQMKQSKSLQIKNQTLPVKRGVGLRMKSKAAQQVKQPSRLRSKQSGSSREPSLDMEEEEEGGPSTRLRKRVQKAQESEVKSTEKQTKRKSAKDVTATKVSARDPKTEDEEAEHQCDIEGCTMSFESKQELLHHKRNVCPVKGCGKKFFSHKYLVQHRRVHEDDRPLKCPWKGCKMSFKWAWARTEHIRVHTGVRPYACAEPGCGQTFRFVSDFSRHKRKTGHLAKKIRQ* 1530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1204 1529 ProSitePatterns Zinc finger C2H2 type domain signature. 1438 1460 IPR013087 -
Tpr7g1204 1529 ProSiteProfiles Zinc finger C2H2 type domain profile. 1466 1495 IPR013087 -
Tpr7g1204 1529 ProSiteProfiles Zinc finger C2H2 type domain profile. 1436 1465 IPR013087 -
Tpr7g1204 1529 MobiDBLite consensus disorder prediction 649 668 - -
Tpr7g1204 1529 PANTHER LYSINE-SPECIFIC DEMETHYLASE 5 1118 - -
Tpr7g1204 1529 PANTHER LYSINE-SPECIFIC DEMETHYLASE 1227 1519 - -
Tpr7g1204 1529 MobiDBLite consensus disorder prediction 1331 1349 - -
Tpr7g1204 1529 MobiDBLite consensus disorder prediction 993 1016 - -
Tpr7g1204 1529 MobiDBLite consensus disorder prediction 637 673 - -
Tpr7g1204 1529 Pfam JmjC domain, hydroxylase 212 330 IPR003347 -
Tpr7g1204 1529 SUPERFAMILY Clavaminate synthase-like 193 362 - -
Tpr7g1204 1529 ProSitePatterns Zinc finger C2H2 type domain signature. 1498 1522 IPR013087 -
Tpr7g1204 1529 Gene3D Cupin 13 352 - -
Tpr7g1204 1529 MobiDBLite consensus disorder prediction 506 531 - -
Tpr7g1204 1529 ProSiteProfiles JmjC domain profile. 179 348 IPR003347 -
Tpr7g1204 1529 SMART JmjN_1 19 60 IPR003349 -
Tpr7g1204 1529 SMART c2h2final6 1436 1460 IPR013087 -
Tpr7g1204 1529 SMART c2h2final6 1466 1490 IPR013087 -
Tpr7g1204 1529 SMART c2h2final6 1413 1435 IPR013087 -
Tpr7g1204 1529 SMART c2h2final6 1496 1522 IPR013087 -
Tpr7g1204 1529 ProSiteProfiles Zinc finger C2H2 type domain profile. 1496 1527 IPR013087 -
Tpr7g1204 1529 MobiDBLite consensus disorder prediction 955 980 - -
Tpr7g1204 1529 Pfam jmjN domain 21 54 IPR003349 -
Tpr7g1204 1529 MobiDBLite consensus disorder prediction 1263 1277 - -
Tpr7g1204 1529 MobiDBLite consensus disorder prediction 1211 1410 - -
Tpr7g1204 1529 MobiDBLite consensus disorder prediction 1219 1246 - -
Tpr7g1204 1529 MobiDBLite consensus disorder prediction 1298 1315 - -
Tpr7g1204 1529 PANTHER LYSINE-SPECIFIC DEMETHYLASE REF6 1227 1519 - -
Tpr7g1204 1529 PANTHER LYSINE-SPECIFIC DEMETHYLASE REF6 5 1118 - -
Tpr7g1204 1529 ProSiteProfiles JmjN domain profile. 20 61 IPR003349 -
Tpr7g1204 1529 SUPERFAMILY beta-beta-alpha zinc fingers 1484 1518 IPR036236 -
Tpr7g1204 1529 Gene3D Classic Zinc Finger 1434 1520 - -
Tpr7g1204 1529 SUPERFAMILY beta-beta-alpha zinc fingers 1452 1494 IPR036236 -
Tpr7g1204 1529 SMART cupin_9 179 348 IPR003347 -
Tpr7g1204 1529 MobiDBLite consensus disorder prediction 993 1020 - -
Tpr7g1204 1529 ProSitePatterns Zinc finger C2H2 type domain signature. 1468 1490 IPR013087 -
Tpr7g1204 1529 MobiDBLite consensus disorder prediction 1359 1410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1204 Tpr-Chr7 12278510 12287219 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1204 1362 1526 C2H2 Transcription Factor Family AT3G48430 62.147 6.87e-66 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Tpr7g1204 JmjC 9.2e-36 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1204 - - mtr:MTR_3g075210 2380.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g1204 7 12278510 12287219 Tpr7g1204 7 12278510 12287219 ECH