Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1199 ATGGGTCGCAATCCACAACAAGTGTGTCTATCTTGTCTTCACAACTGTCGATTCTTTCACTCTCATCGAACACCCACAACCTCCCCTAACTCTTTCTACAAGCTCATCCGTCCTCATACTGATGATTTCAATGTTTTGTATCTTCCACCAAAGTTGAATCATATTATGTCAACCTTGATTGGTAAGAAAATCAATCTCGAGGATTCAGCGGGAGGGCGAACAATTGTTACAATATCAAAAGTTGACGGTTCTTTTGCTTTTAAGGAAGGATGGGATGTTTTCTCAAAGGAGCATGGGCTTGAAATTGGAGATATTGTGGTATTCAATTTCATTAACAAGTTGAATTTTGATGTCAAGATCTATGATGAATCTGTGTGTGAAAGACTAGATTTTTCTAAAAAAAGAAATGGGAGAAAGAGAGATAGAAGTGGTAAGTTTGTTAGACAAAATTGCATAGAAAATATTTCAGAAAATGATAATGAGGATCGAAGGGTTCGATCTAAGTGTACATCAGAACACATTGAAGACCCATGTTACATAACAAGCTACATATATCAAAATGATGATCTAGCTGTTTTTAACAAAGATCCTATGCTTGAAGAAGTGTTGGGTACAGGGGATACCTCATATGCATCTAAACTTTTATTGTTGGGAAGAAACAGTTATCTTGGTGAGACAGATAAAAGCGCATATGACGATAGTTCTGCTCTTATACATGGACAAAATAAAGAGCAGAAATCCATTATGTTCGATAGGGAGGCTCAAGAGTGCCAACTTGTTGAGAGCTTAGGAAGTGCTGAGGCGACAATATCCAAAGACGAAAGTCCCTCAAATGCACTTGAAGTTGAAATTTTTGGAAGAAACAATTCTCTCGTCGATTCTGACAAAGGCGTGCATGACGAGTCTCCTCCTTTGAAACTTGAAGAAAACAAAAAGGGAAAATCCATCATATCCCAAAAGGAAATTGAAGAGTGCCAGTTTGCTGAAGGCTTAGGAAGTGATTCGGCGGCTGAAGAGAGGTGCAACAAGATCAGAAATTTCCTAAATGCTCAAATTCACATTGGTGAAATGAAGGAAGTGCCTATGAACATGACTCCCAAAATTGGCAGTTTCAATTTCAATGATATATTGCATGCAACAGAGTTGCCAAAGGTTGTTAAGGGAGAGTTTAATCAAGATATTGACAGGCACTTTGAGACTGCTGCCACTGTCTCGTCTGTGGTGCTCACTGATAATGACCGTATGAACGCTAAACAGGAACCCAATGATACCTCCAATCTCTTAAATGATCGAATTCACTTTGGTGAAATAAAGGAAGTGCCTATGGAAATGACTCCCAAGTTGGGCAGTTTCAATGACAAATTAAATGCGACAGGGTCGCCAGAGGTTATTGAGGGAGAGTTTAATGAAGCTGAAGCTGCGGAAACTGTCACCTCTGAAGTGCTCACTAATAATCATTATCTTAAATTGTCACTATGCTTGTCGTTATCTCGAGCTGGAATAGGAACGAAGGGGATGGTGGTGTTGCTTAGGGATCCACTGGGGAGATTGTGGCCGGTCCTTTGCCATAAAAAAACATGGTTGGCAAGTGGATGGTTAGATTTTCAAAGAGAAAATAATATTAAACCAGGTGATGTGTGTGTTTTTCGGGTTGTGAACAAGTTTGAGCGTATCATTTCTGTACATATAAACCACAACTGA 1701 0.3933 MGRNPQQVCLSCLHNCRFFHSHRTPTTSPNSFYKLIRPHTDDFNVLYLPPKLNHIMSTLIGKKINLEDSAGGRTIVTISKVDGSFAFKEGWDVFSKEHGLEIGDIVVFNFINKLNFDVKIYDESVCERLDFSKKRNGRKRDRSGKFVRQNCIENISENDNEDRRVRSKCTSEHIEDPCYITSYIYQNDDLAVFNKDPMLEEVLGTGDTSYASKLLLLGRNSYLGETDKSAYDDSSALIHGQNKEQKSIMFDREAQECQLVESLGSAEATISKDESPSNALEVEIFGRNNSLVDSDKGVHDESPPLKLEENKKGKSIISQKEIEECQFAEGLGSDSAAEERCNKIRNFLNAQIHIGEMKEVPMNMTPKIGSFNFNDILHATELPKVVKGEFNQDIDRHFETAATVSSVVLTDNDRMNAKQEPNDTSNLLNDRIHFGEIKEVPMEMTPKLGSFNDKLNATGSPEVIEGEFNEAEAAETVTSEVLTNNHYLKLSLCLSLSRAGIGTKGMVVLLRDPLGRLWPVLCHKKTWLASGWLDFQRENNIKPGDVCVFRVVNKFERIISVHINHN* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1199 566 CDD B3_DNA 500 550 IPR003340 GO:0003677
Tpr7g1199 566 Gene3D - 25 126 IPR015300 -
Tpr7g1199 566 SUPERFAMILY DNA-binding pseudobarrel domain 485 562 IPR015300 -
Tpr7g1199 566 SMART B3_2 478 565 IPR003340 GO:0003677
Tpr7g1199 566 SMART B3_2 32 124 IPR003340 GO:0003677
Tpr7g1199 566 Pfam B3 DNA binding domain 489 555 IPR003340 GO:0003677
Tpr7g1199 566 Pfam B3 DNA binding domain 38 122 IPR003340 GO:0003677
Tpr7g1199 566 CDD B3_DNA 31 122 IPR003340 GO:0003677
Tpr7g1199 566 Gene3D - 468 566 IPR015300 -
Tpr7g1199 566 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS01G0905400-LIKE ISOFORM X1 20 563 - -
Tpr7g1199 566 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 20 563 IPR044837 -
Tpr7g1199 566 SUPERFAMILY DNA-binding pseudobarrel domain 28 126 IPR015300 -
Tpr7g1199 566 ProSiteProfiles B3 DNA-binding domain profile. 31 124 IPR003340 GO:0003677
Tpr7g1199 566 ProSiteProfiles B3 DNA-binding domain profile. 473 566 IPR003340 GO:0003677
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1199 21 127 B3 DNA Binding Superfamily AT4G01580 27.027 2.13e-11 61.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Tpr7g1199 B3 9.9e-09 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1199 - - cam:101495675 466.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g1199 7 12125034 12129982 Tpr7g1199 7 12125034 12129982 ECH