Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1192 ATGGCCAACTACACCAAACATACTCACTCACACTCATATACCATCGACCCTAACACTGGTTACTGTTCACAATCTAGAACCTTCCACAGCCTCCGTCCAATCGTCCCTCTCCCTCCACCTTCTCAACCTCTCTCTCTCACCGACTACTCACTCTCTCTCCTCCCTGAAACCGCCATCTCAAACAACATCCCTGCTCTCATAGACTCAGCCACCGACCACCACCTCACTTACCCCACTTTCCTCCGTCAAATCAAATCCCTCACTTCCTTCCTCCAACAATCCCGCACTTCTCTCTCCAAAGGCCACGTGGCATTAATCCTCACCCCTTCTTCCTTACACGTCCCCGTACTCTATTTCTCTCTCCTCTCCCTTGGTGTCATCGTCGCACCTGCTAACCCACTCAGTTCCCAATCCGAGTTAACTCACTTGATTCAACTTACGAAACCTGTCATCGCATTCGCTACTTCCACAACCGCTTCCAAAATCCCCAACCTCCCATTCGGCACAATCGTAATTGACTCTCCTTCTTTTCTTTCCATACTCGATTCTAACTCTAACTCGGAACTTCGCCGAGTTGAAACGACTCAATCAGACACAGCGGCGATTCTCTTCTCTTCAGGAACAACTGGAAAAATTAAAGGCGTGTTGTTAACTCATCGTAACCTTATTGCGTTGATTGGAGGGTTTTGTTACCTGAAGCACGCGTATGATGACGGCGTTGAAAATGAACCGCATCCGGTGTCGCTGTTTCCGCTTCCTCTTTTTCATGTGTTTGGATTTTTTATGTTGGTCAGGGCTTTGGCTATGGGGGAGACACTGGTGTTGATGCAGAGATTTGATTTTGAAGGTATGTTGAAGGCTGTGCAGAAGTATAGGATTACTTATATGCCGGTGTCGCCGCCGTTGGTTACGGCGTTTGCTAAGTCGGAGTTGGTGAAGAAATATGATCTTAGTTCGATTCGGTTGTTGGGGTCCGGTGGCGCGCCACTTGGCAAGGAAGTTGCGGAGAGCTTCAAAACCAAATTCCCCAATGTGGAAATTGTGCAGGGCTATGGTTTAACTGAAAGTGGAGGAGGGGCAGCAAGAATGATAGGGTTTGATGAGGCTAAGCACTATGGTTCTGTGGGTCGACTAGCAGAAAATATGGAGGCCAAGATAGTCGACCCTGTTACAGGAGAGGCATTATCTCCTGGCCAGAAAGGGGAGCTTTGGTTGCGAGGACCAACAATCATGAAAGGTTATGTAGGAGATGACAAGGCAACTGTTGAGACATTGGATTCAGAGGGATGGCTGAAGACTGGCGATCTTTGTTACTTTGACTCTGATGGTTTTCTATTCATTGTAGATAGACTAAAGGAATTGATCAAATACAAAGCTTATCAGGTTCCCCCAGCTGAATTAGAGCACATACTTCATACAAATCCTGAAATTGCTGATGCTGCAGTAATTCCGTATCCTGATGAAGATGCAGGGCAGATTCCCATGGCTTTTGTGGTAAGAAAGCCTGGAAGTAACATCACTGCTGCTCAGGTCATGGAGTATGTGGCAAAGCAGGTAGCACCATACAAGAAGATACGACGTGTTTCTTTTGTTAACTCTATTCCTAAATCTCCAGCTGGCAAAATTTTAAGAAGAGAATTAGTTGATATTGCTCTAACTAGTGGTTCATCCAAATTGTGA 1680 0.4631 MANYTKHTHSHSYTIDPNTGYCSQSRTFHSLRPIVPLPPPSQPLSLTDYSLSLLPETAISNNIPALIDSATDHHLTYPTFLRQIKSLTSFLQQSRTSLSKGHVALILTPSSLHVPVLYFSLLSLGVIVAPANPLSSQSELTHLIQLTKPVIAFATSTTASKIPNLPFGTIVIDSPSFLSILDSNSNSELRRVETTQSDTAAILFSSGTTGKIKGVLLTHRNLIALIGGFCYLKHAYDDGVENEPHPVSLFPLPLFHVFGFFMLVRALAMGETLVLMQRFDFEGMLKAVQKYRITYMPVSPPLVTAFAKSELVKKYDLSSIRLLGSGGAPLGKEVAESFKTKFPNVEIVQGYGLTESGGGAARMIGFDEAKHYGSVGRLAENMEAKIVDPVTGEALSPGQKGELWLRGPTIMKGYVGDDKATVETLDSEGWLKTGDLCYFDSDGFLFIVDRLKELIKYKAYQVPPAELEHILHTNPEIADAAVIPYPDEDAGQIPMAFVVRKPGSNITAAQVMEYVAKQVAPYKKIRRVSFVNSIPKSPAGKILRRELVDIALTSGSSKL* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1192 559 ProSitePatterns Putative AMP-binding domain signature. 202 213 IPR020845 -
Tpr7g1192 559 PANTHER 4-COUMARATE--COA LIGASE-LIKE 9 28 548 - -
Tpr7g1192 559 SUPERFAMILY Acetyl-CoA synthetase-like 60 552 - -
Tpr7g1192 559 Gene3D - 41 452 IPR042099 -
Tpr7g1192 559 Pfam AMP-binding enzyme 62 457 IPR000873 -
Tpr7g1192 559 Pfam AMP-binding enzyme C-terminal domain 466 541 IPR025110 -
Tpr7g1192 559 Gene3D - 453 553 IPR045851 -
Tpr7g1192 559 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 28 548 - -
Tpr7g1192 559 CDD 4CL 64 547 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1192 Tpr-Chr7 11989253 11996717 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1192 10 559 Monolignol Biosynthesis Gene Families AT5G63380 59.537 0.0 681
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1192 K01904 - gmx:100804044 853.203