LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr7g1192	ATGGCCAACTACACCAAACATACTCACTCACACTCATATACCATCGACCCTAACACTGGTTACTGTTCACAATCTAGAACCTTCCACAGCCTCCGTCCAATCGTCCCTCTCCCTCCACCTTCTCAACCTCTCTCTCTCACCGACTACTCACTCTCTCTCCTCCCTGAAACCGCCATCTCAAACAACATCCCTGCTCTCATAGACTCAGCCACCGACCACCACCTCACTTACCCCACTTTCCTCCGTCAAATCAAATCCCTCACTTCCTTCCTCCAACAATCCCGCACTTCTCTCTCCAAAGGCCACGTGGCATTAATCCTCACCCCTTCTTCCTTACACGTCCCCGTACTCTATTTCTCTCTCCTCTCCCTTGGTGTCATCGTCGCACCTGCTAACCCACTCAGTTCCCAATCCGAGTTAACTCACTTGATTCAACTTACGAAACCTGTCATCGCATTCGCTACTTCCACAACCGCTTCCAAAATCCCCAACCTCCCATTCGGCACAATCGTAATTGACTCTCCTTCTTTTCTTTCCATACTCGATTCTAACTCTAACTCGGAACTTCGCCGAGTTGAAACGACTCAATCAGACACAGCGGCGATTCTCTTCTCTTCAGGAACAACTGGAAAAATTAAAGGCGTGTTGTTAACTCATCGTAACCTTATTGCGTTGATTGGAGGGTTTTGTTACCTGAAGCACGCGTATGATGACGGCGTTGAAAATGAACCGCATCCGGTGTCGCTGTTTCCGCTTCCTCTTTTTCATGTGTTTGGATTTTTTATGTTGGTCAGGGCTTTGGCTATGGGGGAGACACTGGTGTTGATGCAGAGATTTGATTTTGAAGGTATGTTGAAGGCTGTGCAGAAGTATAGGATTACTTATATGCCGGTGTCGCCGCCGTTGGTTACGGCGTTTGCTAAGTCGGAGTTGGTGAAGAAATATGATCTTAGTTCGATTCGGTTGTTGGGGTCCGGTGGCGCGCCACTTGGCAAGGAAGTTGCGGAGAGCTTCAAAACCAAATTCCCCAATGTGGAAATTGTGCAGGGCTATGGTTTAACTGAAAGTGGAGGAGGGGCAGCAAGAATGATAGGGTTTGATGAGGCTAAGCACTATGGTTCTGTGGGTCGACTAGCAGAAAATATGGAGGCCAAGATAGTCGACCCTGTTACAGGAGAGGCATTATCTCCTGGCCAGAAAGGGGAGCTTTGGTTGCGAGGACCAACAATCATGAAAGGTTATGTAGGAGATGACAAGGCAACTGTTGAGACATTGGATTCAGAGGGATGGCTGAAGACTGGCGATCTTTGTTACTTTGACTCTGATGGTTTTCTATTCATTGTAGATAGACTAAAGGAATTGATCAAATACAAAGCTTATCAGGTTCCCCCAGCTGAATTAGAGCACATACTTCATACAAATCCTGAAATTGCTGATGCTGCAGTAATTCCGTATCCTGATGAAGATGCAGGGCAGATTCCCATGGCTTTTGTGGTAAGAAAGCCTGGAAGTAACATCACTGCTGCTCAGGTCATGGAGTATGTGGCAAAGCAGGTAGCACCATACAAGAAGATACGACGTGTTTCTTTTGTTAACTCTATTCCTAAATCTCCAGCTGGCAAAATTTTAAGAAGAGAATTAGTTGATATTGCTCTAACTAGTGGTTCATCCAAATTGTGA	1680	0.4631	MANYTKHTHSHSYTIDPNTGYCSQSRTFHSLRPIVPLPPPSQPLSLTDYSLSLLPETAISNNIPALIDSATDHHLTYPTFLRQIKSLTSFLQQSRTSLSKGHVALILTPSSLHVPVLYFSLLSLGVIVAPANPLSSQSELTHLIQLTKPVIAFATSTTASKIPNLPFGTIVIDSPSFLSILDSNSNSELRRVETTQSDTAAILFSSGTTGKIKGVLLTHRNLIALIGGFCYLKHAYDDGVENEPHPVSLFPLPLFHVFGFFMLVRALAMGETLVLMQRFDFEGMLKAVQKYRITYMPVSPPLVTAFAKSELVKKYDLSSIRLLGSGGAPLGKEVAESFKTKFPNVEIVQGYGLTESGGGAARMIGFDEAKHYGSVGRLAENMEAKIVDPVTGEALSPGQKGELWLRGPTIMKGYVGDDKATVETLDSEGWLKTGDLCYFDSDGFLFIVDRLKELIKYKAYQVPPAELEHILHTNPEIADAAVIPYPDEDAGQIPMAFVVRKPGSNITAAQVMEYVAKQVAPYKKIRRVSFVNSIPKSPAGKILRRELVDIALTSGSSKL*	560

Showing 1 to 1 of 1 entries

Annotation information

Show entries

Search:

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr7g1192	559	ProSitePatterns	Putative AMP-binding domain signature.	202	213	IPR020845	-
	Tpr7g1192	559	PANTHER	4-COUMARATE--COA LIGASE-LIKE 9	28	548	-	-
	Tpr7g1192	559	SUPERFAMILY	Acetyl-CoA synthetase-like	60	552	-	-
	Tpr7g1192	559	Gene3D	-	41	452	IPR042099	-
	Tpr7g1192	559	Pfam	AMP-binding enzyme	62	457	IPR000873	-
	Tpr7g1192	559	Pfam	AMP-binding enzyme C-terminal domain	466	541	IPR025110	-
	Tpr7g1192	559	Gene3D	-	453	553	IPR045851	-
	Tpr7g1192	559	PANTHER	LONG-CHAIN-FATTY-ACID--COA LIGASE	28	548	-	-
	Tpr7g1192	559	CDD	4CL	64	547	-	-

Showing 1 to 9 of 9 entries

Duplication type information

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr7g1192	Tpr-Chr7	11989253	11996717	Dispersed/Transposed

Showing 1 to 1 of 1 entries

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tpr7g1192	10	559	Monolignol Biosynthesis Gene Families	AT5G63380	59.537	0.0	681

Showing 1 to 1 of 1 entries

Pathway information

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr7g1192	K01904		-	gmx:100804044	853.203

Showing 1 to 1 of 1 entries