Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1184 ATGGCGGCTCTTACCTCTCTCCCTCCTTTTCCCCACACTCTCCTCTTCCTCCGCTCAAAATCAACCAGATTTTCCGTTTCAGCTTCAGCGCTCCCAGCCTCAGGAAAAGATGGATCTAATTCTAGAGTGCCTCAGACAAGAAGGAGAAAAATCGAAGGTCCACGAAAAAGTATGGAAGATTCTGTTCAACGCAAGATGGAGCAATTTTATGAAGGAAACGATGGACCGCCTTTACGTGTTCTTCCTATTGGTGGTTTAGGTGAAATTGGAATGAATTGTATGCTTGTAGGGAATCATGACCGTTATATTCTCATCGATGCTGGTATCATGTTTCCTGACTATGATGACCTTGGAGTGCAAAAGATTATACCTGATACAACATTTATAAGAAAATGGAGCCACAAAATTGAAGCGCTTGTTATAACGCATGGTCATGAAGATCATATCGGTGCCTTGCCTTGGGTCATCCCAGCATTGGATCCCAATACACCAATTTTTGCATCATCCTTTACAATGGAGCTTATAAAAAAACGTTTGAAGGAACATGGTATTTTTCTTACATCTAGACTCAAAATATTTAGAACAAAGAACAAGTTTGTGGCTGGACCATTTGAGATAGAACCTATCAGGGTGACTCATTCTATTCCTGACTGTTGTGGATTGGTTCTTCGTTGTTCCGATGGTACCATTCTTCACACTGGGGATTGGAAGATTGACGAAACACCACTTGATGGGAAAGTTTTTGATCGAGAGGCTTTAGAGGAACTCTCTAAAGAAGGAGTAACATTGATGATGAGCGATTCAACAAATGTGCTCTCACCTGGAAGGACAACAAGTGAATCTGTTGTAGCAGATTCATTATTGAGGCATATTTCAGAATCCAAAGGAAGAGTTATTACAACCCAGTTTGCATCAAATCTACACAGGATTGGAAGTGTGAAAGCTGCTGCTGATTTAACTGGCAGAAAGTTGGTATTTGTTGGCATGTCTTTAAGGACATACTTAGAAGCAGCTTGGAAGGATGGAAAGGCTCCATTTGATCCATCCACTCTGGTGAAAGCAGAGGATATTGATGCTTATGCACCTAAGGATCTGCTTATTGTAACAACAGGATCTCAAGCAGAGCCACGTGCTGCCTTAAATCTTGCATCTTATGGAAGTAGCCATGCTTTCAAACTAACCAAGGAAGATATCGTTTTGTATTCTGCTAAGGTTATCCCCGGTAATGAGAATCGTGTGATGGAAATGATGAATCGCATATCAGAGATTGGATCAACAATAGTTATGGGGAGCAATAAATTTTTGCACACATCTGGTCATGCATATCGTGGAGAATTGGAGGAAGTGCTTAGAATAGTGAAGCCGCAACATTTTCTTCCTGTACATGGAGAATACTTGTTCCTCAAGGAGCATGAGTCACTTGGAAAATCAACCGGCATTCATCATACTGCTGTTATTAAGAATGGAGAAATGCTTGGTGTTTCACATTTGAGAAACAGAAAGGTTCTTTCTAATGGTTTCATTTCCCTTGGAAAAGAGAATTTACAGTTGAAATATAGCGACGGCGACAAAGCATTTGGTACATCCAGTGAACTCTGCATTGATGAAAGATTGAGAATTGCGTTAGATGGCATCATTGTGATTAGCATGGAAATATCTCGCCCTAAAAATTTAGAAAGTTTGGCCGAAAACACCTTAAAAGGGAAGATAAGAATTACCACCAGATGCCTATGGCTCGACAAAGGGAAGCTGTTAGATGCACTACATAAAGCTGCTCATGCAGCTCTTTCTAGCTGTCCCGTTAAAAGTCCACTGGCTCACATGGAAAGAACTGTGTCTGAAGTGTTGAGGAAGATGGTGAGGAAGTACAGTGGTAAACGGCCTGAAGTAATTGCCATTGCCACAGAAAATCCCGGAGCTGTTTTTGCTGATGAGATAAACAAAAAATTGTCTGGCAAATCCCACGTTGGTCCTGGAGTACCAACATTAAGAAAAAAAGTGGATGAACATAGAAAGGAAAACCAGTCCACCAAACTGCAAACAAGAGATGATGACATTGATATTGAAGGACTATTACCCGAGAAAGACACCACTACAAGTCGAGCTGAGGGCGATTTACCTGACTCGGAGGATTCGGTTGAATTTTGGAAACAATTCATTGCATCATCGGTTGAGAAGTCAAACAAAGCTAACAATGGTTATGTTTCACGAAAAAAGTATAAGTCCAATGTGAAGAAAGATGATTCTGAAGCCATCGATGAAGCCAAGTCTGAAGAAATGTCTAATGCTGAGCCAGAGTCTTCGAAATCAGTAAAGAAAAATAAATGGAAAGCTGAGGAAGTTAAGAAGCTGATTGATTTACGGAGTGACCTCCGCGACAGATTTAAAGTTGTGAAGGGACGGATGGCTCTCTGGGAAGAAATATCTCAGAGCTTGTTGGCTGATGGGATCAGCAGAAGTCCTGCACAATGCAAATCTCTATGGACATCCTTGGTACTGAAATATGAGGACATCAAGAATGGGAAGGATACCAGAAAAAATTGGCAATATCTTGAGGACATGGAAAAGATATTGTCTAGTGACGAAGAACCCGCAACAAATTGA 2604 0.4101 MAALTSLPPFPHTLLFLRSKSTRFSVSASALPASGKDGSNSRVPQTRRRKIEGPRKSMEDSVQRKMEQFYEGNDGPPLRVLPIGGLGEIGMNCMLVGNHDRYILIDAGIMFPDYDDLGVQKIIPDTTFIRKWSHKIEALVITHGHEDHIGALPWVIPALDPNTPIFASSFTMELIKKRLKEHGIFLTSRLKIFRTKNKFVAGPFEIEPIRVTHSIPDCCGLVLRCSDGTILHTGDWKIDETPLDGKVFDREALEELSKEGVTLMMSDSTNVLSPGRTTSESVVADSLLRHISESKGRVITTQFASNLHRIGSVKAAADLTGRKLVFVGMSLRTYLEAAWKDGKAPFDPSTLVKAEDIDAYAPKDLLIVTTGSQAEPRAALNLASYGSSHAFKLTKEDIVLYSAKVIPGNENRVMEMMNRISEIGSTIVMGSNKFLHTSGHAYRGELEEVLRIVKPQHFLPVHGEYLFLKEHESLGKSTGIHHTAVIKNGEMLGVSHLRNRKVLSNGFISLGKENLQLKYSDGDKAFGTSSELCIDERLRIALDGIIVISMEISRPKNLESLAENTLKGKIRITTRCLWLDKGKLLDALHKAAHAALSSCPVKSPLAHMERTVSEVLRKMVRKYSGKRPEVIAIATENPGAVFADEINKKLSGKSHVGPGVPTLRKKVDEHRKENQSTKLQTRDDDIDIEGLLPEKDTTTSRAEGDLPDSEDSVEFWKQFIASSVEKSNKANNGYVSRKKYKSNVKKDDSEAIDEAKSEEMSNAEPESSKSVKKNKWKAEEVKKLIDLRSDLRDRFKVVKGRMALWEEISQSLLADGISRSPAQCKSLWTSLVLKYEDIKNGKDTRKNWQYLEDMEKILSSDEEPATN* 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1184 867 Gene3D - 776 836 - -
Tpr7g1184 867 CDD RNaseJ_MBL-fold 81 492 - -
Tpr7g1184 867 Gene3D - 82 494 IPR036866 -
Tpr7g1184 867 MobiDBLite consensus disorder prediction 28 61 - -
Tpr7g1184 867 Pfam Zn-dependent metallo-hydrolase RNA specificity domain 432 481 IPR011108 -
Tpr7g1184 867 Gene3D - 530 636 - -
Tpr7g1184 867 MobiDBLite consensus disorder prediction 662 709 - -
Tpr7g1184 867 MobiDBLite consensus disorder prediction 653 709 - -
Tpr7g1184 867 Pfam Beta-lactamase superfamily domain 101 237 IPR001279 -
Tpr7g1184 867 CDD GT1 774 839 - -
Tpr7g1184 867 Pfam Myb/SANT-like DNA-binding domain 774 857 IPR044822 -
Tpr7g1184 867 PANTHER RIBONUCLEASE J 1 861 - -
Tpr7g1184 867 Gene3D - 279 429 IPR042173 -
Tpr7g1184 867 MobiDBLite consensus disorder prediction 42 61 - -
Tpr7g1184 867 SMART sant 772 834 IPR001005 -
Tpr7g1184 867 PANTHER RNA-METABOLISING METALLO-BETA-LACTAMASE 1 861 - -
Tpr7g1184 867 SUPERFAMILY Metallo-hydrolase/oxidoreductase 78 492 IPR036866 -
Tpr7g1184 867 MobiDBLite consensus disorder prediction 745 773 - -
Tpr7g1184 867 ProSiteProfiles Myb-like domain profile. 768 832 IPR001005 -
Tpr7g1184 867 SMART Lactamase_B_5a 90 287 IPR001279 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1184 775 860 Trihelix Transcription Factor Family AT2G38250 31.818 3.11e-08 54.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Tpr7g1184 Lactamase_B_2 8.7e-10 CL0381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1184 - - gmx:100783850 1390.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g1184 7 11891524 11910257 Tpr7g1184 7 11891524 11910257 ECH