Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1178 ATGGTTTCAACGAGACGCAACAGTGGTGGATCTTTCCCTTCCAACAATAACAACAACAACAACAACAACAACTCTAAAAGACCTTCTTCATCTTCCGATGACAAACCTCCTTCTTCTCCTTCTCCTAAGCGTCAAAAGGCTGACAATGGTGCTACTGCTGCTGAGAAACCGATTTCTCCGGCGGAGAATTCCAAGGATTTCTCTACTCCTGACCCTCCCGCCGATCCCGGAGAATGTCGTGACACCGATGCTCAGATCGATGAACCGGCAGTAACTGCTGATGATAAAACCGATGCAACTCCACCGATCGCTGACGGTTCTTCGCCGACTCTGGTAGCTGATAAACCTAGGGCTTCGTTTTCTTCATGGAGTATATATCAGAAGCAAAACCCGAACCTTGAGTCTTCAGCTCCATGGTGTCGGCTTCTGTCTCAGTCTGCACAGCATCCAAATGTTTCCATTTGCATACCCAACTTTACTATTGGCTCTAGCAGAAATTGCAACTTTCATTTGAAGGATCATACTATAAGTGGAAATTTATGCAAGATCAAACATACACAGCGCGAGGGACTTGATGCGGCTGTGCTAGAAAGTACGGGTAGCAAAGGATCTGTGCTAGTTAATGGGACACTTGTCAAGAAGAATAACTGCTGCGCGCTTAACTCAGGCGATGAGGTGGTTTTTGGCTTGCATGGAAATCATTCTTATATTTTTCAGCAAGTAAACACCGAGGTTGCAGTTAAGGGTGCAGAAGTTCAGAGTGGTGTTGGTAAATTTATGCAACTTGAAAGGAGAAGCGGCGACCCTTCAGCCGTGGCTGGGGCTTCTATCTTGGCTTCTCTTTCTAATCTCAGGCAGGATCTTACAAGATGGAAGTCTCCATCTCAGACTGCCAGTAAACCTCACCAGGCTGCTGATGTTTCTATTCATACTGTTCTCCCTGATGGCACAGAAATTGAGCTTGATGGCCTGGAAGGAAACACAACTCCAAATATAGGAACTGATAAAGCTGCTGATGCTGAGGCTAGCAACAAGAACTCTCCTATGGAATGCGATCCAGAGGATGCGGGCGCAGAGCCAGGCAATGTAAAATTCTCTGGGGTGAATGATTTGCTAAGGCCTTTCTTCAGGATTCTAGCTGGATCTACTACTTGTAAACTGAAATTGAGCAAAAGTATCTGTAAACAGGTATTGGAAGAAAGAAATGGGGCGGAGGACACACAGGCTGCATCGACTTCTGGTACATCTGTACGCTGTTCAGTTTTTAAAGAAGATGCTCATGCTGCAATACTGGATGAAAAAGAACTAGAAGTGTCCTTTGACAACTTCCCATACTATTTAAGTGAGAATACAAAAAATGTCCTGATTGCAGCTTGCTTTATACACCTGAAGCATAAAGAACATGCAAAGTACACCACAGATCTTACCACCGTAAATCCTCGTATTCTACTTTCAGGACCTGCAGGGTCAGAAATATATCAGGAGATGCTTGTAAAAGCACTTGCTAAATACTTTGGTGCTAAATTGCTCATATTTGATAGCCAGTCACTTTTGGGTGGTTTATCTTCTAAGGAAGCTGAACTGCTCAAAGATGGATTTAATGCTGAGAAATCTTGCAGTCCTACAGCCACAGACGCGACTAAGCGCACGGATCCACCAGCTAGTGAAATAGATACACCTAGCTCTTCAAATGCACCTACTCCACATGGCCTTGAATCTCAAGCTAAGTTGGAAACTGATAGTGTACCGTCAACGTCTGGGACACCTAAAAATTGCTTGTTTAAACTGGGCGACCGGGTTAAGTATAGTCCATCTTCGGGTTGTTTGTATCAGACATCTTCTTCAAGGGGTCCATCTAATGGAAGTCGAGGGAAAGTTGTCTTAATTTTCGATGATAATCCATTGTCAAAAATTGGTGTAAGATTTGATAAACTTATACCTGATGGGGTTGATCTTGGAGGTGCCTGTGAGGGGGGTCAAGGATTTTTCTGCAACGTCACTGATCTTCGATTGGAAAACAGTGGCATTGACGAACTCGACAAATTACTTATTAATACATTGTTTGAGGTTGTAACTAGTGAGAGTAGAAATTCACCTTTCATTTTGTTCATGAAAGAAGCAGAAAAGTCTATAGTAGGAAATGGAGACCCATATTCATTTAAAAGTAAGCTTGAAATGCTTCCCGACAATGTGGTGGTAATAGGTTCACACACTCACACCGACAATCGAAAGGAGAAGTCACATCCTGGGGGTTTGCTTTTTACAAAGTTTGGCAGCAATCAGACTGCCCTCCTTGACTTGGCTTTCCCGGATAGTTTCGGAAGATTACATGATAGGGGTAAAGAAGTCCCAAAACCAAACAAAACTTTGACCAAGTTATTTCCAAATAAAGTAACAATTCACATGCCACAGGATGAGGCACTTCTAGCATCATGGAAACAGCAACTTGATCGAGATGTGGAGACTCTTAAAGTCAAAGGAAATTTGCACCATTTGCGCACCGTTTTAAGCCGCAGTGGGATGGAATGTGAAGGACTCGAGGCCTTGGGTGTCAATGATCTGACACTTACAAATGAAAATTCAGAGAAGATTGTTGGTTGGGCTTTAAGCCACCATCTGATGCAGAATTCAGAAGTTGACGCTGATGCAAAGCTTGTGTTGTCTTGTGAGAGCCTCCAGTATGGAATTGGGATCTTACAAGCTATCCAGAATGAGTCGAAGAGCCTAAAGAAGTCTCTTAAGGATGTTGTAACAGAAAACGAGTTTGAAAAGAGGCTTTTGGGTGATGTTATTCCACCTAGCGACATTGGTGTTACTTTTGATGATATTGGAGCTCTTGAAAATGTTAAGGATACATTGAAGGAATTGGTGATGCTTCCTTTACAGAGGCCCGAGCTTTTTTGCAAGGGGCAGTTAACCAAGCCATGCAAGGGCATCCTATTATTTGGTCCCCCGGGAACAGGTAAGACAATGCTTGCCAAGGCAGTTGCTACCGACGCTGGTGCAAACTTCATCAATATTTCCATGTCAAGCATCACATCTAAGGTTAGATTCGCTTCACTTTTTTTATTTTATTCTCTTTTTTTTATCAGTTCATTGTTCATCTTGACTAGTATTCTCCACATTTTCCTTCAGTGGTTTGGTGAGGGTGAAAAATACGTCAAAGCTGTTTTCTCCCTGGCAAGTAAAATTGCTCCCAGTGTGATATTTGTTGATGAAGTTGATAGCATGTTGGGCCGGAGGGAAAATCCAGGGGAGCATGAGGCCATGCGAAAGATGAAAAATGAATTCATGGTGAACTGGGATGGCTTACGTACAAAGGATACTGAACGTGTTCTTGTGCTCGCAGCCACCAATAGACCTTATGACCTTGATGAGGCTGTCATACGAAGGCTGCCTCGGAGATTAATGGTAAATTTACCAGATGCTCCAAATAGAGCAAAAATATTGAAAGTTATACTGGCAAAAGAGGACCTGTCTTCTGATGTTGATCTGAGTGCAATTGCAAGTATGACTGACGGATATTCTGGAAGTGATCTTAAGAACTTATGTGTAACCGCCGCACACCGTCCTATTAAAGAGATACTAGAAAAGGAAAAAAAGGAACTTGCTGCTGCTCTAGCAGAAGGTAGACCTGCACCTGCATTACGTGGAAGTGATGATATCCGATCTTTAAACATGGAAGACTTCAAACATGCTCACCAACAGGTATGTGCAAGTGTTTCCTCTGAATCTGTAAATATGACAGAGCTTGTTCAATGGAATGAACTCTACGGTGAAGGTGGTTCAAGAGTTAAGAAAGCACTAAGTTATTTCATGTGA 3822 0.4288 MVSTRRNSGGSFPSNNNNNNNNNNSKRPSSSSDDKPPSSPSPKRQKADNGATAAEKPISPAENSKDFSTPDPPADPGECRDTDAQIDEPAVTADDKTDATPPIADGSSPTLVADKPRASFSSWSIYQKQNPNLESSAPWCRLLSQSAQHPNVSICIPNFTIGSSRNCNFHLKDHTISGNLCKIKHTQREGLDAAVLESTGSKGSVLVNGTLVKKNNCCALNSGDEVVFGLHGNHSYIFQQVNTEVAVKGAEVQSGVGKFMQLERRSGDPSAVAGASILASLSNLRQDLTRWKSPSQTASKPHQAADVSIHTVLPDGTEIELDGLEGNTTPNIGTDKAADAEASNKNSPMECDPEDAGAEPGNVKFSGVNDLLRPFFRILAGSTTCKLKLSKSICKQVLEERNGAEDTQAASTSGTSVRCSVFKEDAHAAILDEKELEVSFDNFPYYLSENTKNVLIAACFIHLKHKEHAKYTTDLTTVNPRILLSGPAGSEIYQEMLVKALAKYFGAKLLIFDSQSLLGGLSSKEAELLKDGFNAEKSCSPTATDATKRTDPPASEIDTPSSSNAPTPHGLESQAKLETDSVPSTSGTPKNCLFKLGDRVKYSPSSGCLYQTSSSRGPSNGSRGKVVLIFDDNPLSKIGVRFDKLIPDGVDLGGACEGGQGFFCNVTDLRLENSGIDELDKLLINTLFEVVTSESRNSPFILFMKEAEKSIVGNGDPYSFKSKLEMLPDNVVVIGSHTHTDNRKEKSHPGGLLFTKFGSNQTALLDLAFPDSFGRLHDRGKEVPKPNKTLTKLFPNKVTIHMPQDEALLASWKQQLDRDVETLKVKGNLHHLRTVLSRSGMECEGLEALGVNDLTLTNENSEKIVGWALSHHLMQNSEVDADAKLVLSCESLQYGIGILQAIQNESKSLKKSLKDVVTENEFEKRLLGDVIPPSDIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATDAGANFINISMSSITSKVRFASLFLFYSLFFISSLFILTSILHIFLQWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERVLVLAATNRPYDLDEAVIRRLPRRLMVNLPDAPNRAKILKVILAKEDLSSDVDLSAIASMTDGYSGSDLKNLCVTAAHRPIKEILEKEKKELAAALAEGRPAPALRGSDDIRSLNMEDFKHAHQQVCASVSSESVNMTELVQWNELYGEGGSRVKKALSYFM* 1274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1178 1273 SMART AAA_5 975 1142 IPR003593 -
Tpr7g1178 1273 CDD FHA 139 239 IPR000253 GO:0005515
Tpr7g1178 1273 Gene3D - 138 247 - -
Tpr7g1178 1273 ProSitePatterns AAA-protein family signature. 1112 1131 IPR003960 GO:0005524|GO:0016887
Tpr7g1178 1273 Pfam AAA+ lid domain 1162 1197 IPR041569 -
Tpr7g1178 1273 Coils Coil 899 919 - -
Tpr7g1178 1273 Gene3D - 937 1248 IPR027417 -
Tpr7g1178 1273 Pfam FHA domain 160 229 IPR000253 GO:0005515
Tpr7g1178 1273 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 396 1015 - -
Tpr7g1178 1273 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1034 1273 - -
Tpr7g1178 1273 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 93 371 - -
Tpr7g1178 1273 MobiDBLite consensus disorder prediction 1 46 - -
Tpr7g1178 1273 MobiDBLite consensus disorder prediction 1 78 - -
Tpr7g1178 1273 MobiDBLite consensus disorder prediction 335 356 - -
Tpr7g1178 1273 MobiDBLite consensus disorder prediction 539 584 - -
Tpr7g1178 1273 Gene3D - 1141 1235 - -
Tpr7g1178 1273 CDD AAA 977 1140 - -
Tpr7g1178 1273 MobiDBLite consensus disorder prediction 91 113 - -
Tpr7g1178 1273 PANTHER ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 1-A ISOFORM 1 93 371 - -
Tpr7g1178 1273 PANTHER ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 1-A ISOFORM 1 1034 1273 - -
Tpr7g1178 1273 PANTHER ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 1-A ISOFORM 1 396 1015 - -
Tpr7g1178 1273 Pfam ATPase family associated with various cellular activities (AAA) 979 1138 IPR003959 GO:0005524|GO:0016887
Tpr7g1178 1273 SUPERFAMILY SMAD/FHA domain 119 239 IPR008984 GO:0005515
Tpr7g1178 1273 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 938 1248 IPR027417 -
Tpr7g1178 1273 MobiDBLite consensus disorder prediction 539 570 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1178 Tpr-Chr7 11796376 11814674 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1178 938 1216 Calmodulin-binding Proteins AT3G56690 36.014 6.84e-38 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1178 - - gmx:100780098 1980.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g1178 7 11796376 11814674 Tpr7g1178 7 11796376 11814674 ECH