Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1167 ATGGGAAGGTCCCCATGTTGTGATGAGAGCGGTCTTAAGAAAGGACCTTGGACTCCTGAAGAAGATCAAAAGCTAGTTGAACACATTCAACAACATGGTCATGGAAGTTGGAGAGCACTGCCTAAGCTAGCTGGTCTTAATAGATGTGGAAAAAGTTGTAGGCTAAGGTGGACAAATTATTTAAGACCTGATATTAAGAGAGGAAAATTTTCTCAAGAAGAGGAGCAAACAATTTTGCATCTTCATTCTATCCTTGGAAACAAATGGTCGGCAATTGCAACACATCTACCCGGAAGAACAGATAACGAGATAAAGAATTTCTGGAACACTCATTTGAAGAAAAAATTGATTCAAATGGGTTTTGATCCAATGACTCACCAACCAAGAACTGATCTTGTTTCTACTTTGCCATATCTACTAGCTTTGGCAAACATGACAGAACTTAGGGATCATCATCAATCATGGGATGAACAACAGACAGCTATGAGTAGTTTACAAGCAGAGGCAGTTCATCTTGCAAAGCTTCAATGCCTTCATTATTTACTCCAATCTTCAAATTCTTCCTTAAACATTAATAATAATATTAATAATACCAATAATTCTTCCTATGACCAAAATGCCATCATCACAAACATGGAACAAGAACCTTTAAGTTTGTTAAACACAATCTCTAATGTGAAACAGAACACAATAATAGATCATGCAGCCACATTTTCTAGCTCTCAACCACTCCACCACCAAAGTATGATACCTCATGATCACTTTTTAGACCCACAACAAGTCTCTTTCAGTTCACAATCATGTTTGAATAATGAACAGGGTCAAAATGGTACTATTACTAACTATGCAATGCTAAGTCAAAGGAATCAGGATTATCCTACAGTTGATCATGAAACATCATGGATTAATGTTCCATCTTCTGCTCCATTATCAATTCCTACAAATGCTATAACAGGAGATGCAAGTAGCTGCACTTCTAGCTATGGAGGAACACCCTCTGCACCTTATTGGTCTGAACTTTTTTTTGAGGACCCCATTATGCATGATTTATCTTAA 1056 0.3712 MGRSPCCDESGLKKGPWTPEEDQKLVEHIQQHGHGSWRALPKLAGLNRCGKSCRLRWTNYLRPDIKRGKFSQEEEQTILHLHSILGNKWSAIATHLPGRTDNEIKNFWNTHLKKKLIQMGFDPMTHQPRTDLVSTLPYLLALANMTELRDHHQSWDEQQTAMSSLQAEAVHLAKLQCLHYLLQSSNSSLNINNNINNTNNSSYDQNAIITNMEQEPLSLLNTISNVKQNTIIDHAATFSSSQPLHHQSMIPHDHFLDPQQVSFSSQSCLNNEQGQNGTITNYAMLSQRNQDYPTVDHETSWINVPSSAPLSIPTNAITGDASSCTSSYGGTPSAPYWSELFFEDPIMHDLS* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1167 351 CDD SANT 69 112 IPR001005 -
Tpr7g1167 351 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Tpr7g1167 351 Gene3D - 69 116 - -
Tpr7g1167 351 CDD SANT 16 61 IPR001005 -
Tpr7g1167 351 PANTHER TRANSCRIPTION FACTOR MYB39-LIKE 1 340 - -
Tpr7g1167 351 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Tpr7g1167 351 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Tpr7g1167 351 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 340 - -
Tpr7g1167 351 SMART sant 66 114 IPR001005 -
Tpr7g1167 351 SMART sant 13 63 IPR001005 -
Tpr7g1167 351 Gene3D - 11 67 - -
Tpr7g1167 351 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Tpr7g1167 351 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Tpr7g1167 351 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Tpr7g1167 351 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1167 Tpr-Chr7 11645629 11647470 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1167 1 351 MYB Transcription Factor Family AT1G34670 50.129 1.06e-111 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Tpr7g1167 Myb_DNA-binding 8.8e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1167 K09422 - gmx:100811162 472.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g1167 7 11645629 11647470 Tpr7g1167 7 11645629 11647470 ECH