Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1151 ATGGATTTAACGTCCACTTCATCTGGAATTGGTGATATTCTTTCGACTGAAGCATCTGGAAGTGAACCATTGACTTCATCTGATAGTTCTCAATGTTGCCACCCTGACATTAAGAAATCATGGGACACTTTAGTATTTCATTCTATTAAAGAGGTTGAAGATTTCTATGGTCAGTATGCATATAAAACTGGATTTTCAATCAGGAGTATGTTGAAGTCGAAGAATAATTCAAAGAATAAGAAGTCGGATAAGATACATTACCTACGTTATGTTTGTAACAAAGAAGGTTTTAAGAAAGGAAGTTTGCTTAATCCGAACAACAAGCCAAGATCAGACAGTCCGGTTGTTATTGAATTTGAAAAAGTGAAAGAGAGACCAGAGGAAAGGGTTGGTTGTAAAGCTGGAATATATCTGAAGTTGGATGAAACATTGAATGTTTATAAGATATATAGATGGGAAGGGACACACTGTCATGAACTACATAGAAAAGAGCATCACCGCTACCTCAGATCATTCCGAGAAGTAAATGAAGTTCAAGGACAACTTGCTTTAATTAATTCTAAAGCTGGAATGTCGATGAGGACGTCTTATGAAGTCATGGGTCAGGGAGTTGGAGGCACGGAGAATCTCCCATTTCGGTTTTCGGACTTAAAGAATTATTTGATGACAATTCGTTCAAAGGAGATGATAAGGGGTGAAGCAACTGTAATTCAAGAGTTTTTTAGGAATGAAGCTATGTCGAAACCATCTTTTTATTATGATATGCAAGTTGATGCTGCAGAAGACATAGCTAGCATTTTTTGGGCAGATGGAATTATGCAACTGGATTATTCTTTATTTGGCGATGTCGTCAGTTTCGATACAACGTACCGAACAAACAATCAATATCGTCCATTAGCCGCCTTTCTTGGTTTTGACAATCATCGCAAGAGTGTCTTATTTGGTGCTGCGTTACTGTATGATGAGACAGCTGCTACTTTTGATTGGTTATTTACCACATTCTTGAAGTGCATGTCTAATAAGAAACCACAGACGATATATACAGACCAGGCTACTGCGTTGTTGAAGTCAGTTCCGAATATTTTTCAAGGTGTTTTCCATGGTCTTTGTTCGTGGCACATGTCAGAGAATGCAAAGAAAAATCTCGGTACTCGTGCGAACAGTTCCTTTTTTGATGAGTTAACTATTTTGATTTCAAATGTAGAAGACGAATCAGATTTTGACTACAATTGGGATCGGATGATGAAAAATTGTTTTGATGGAAGGCCTATTTCAGACTGGACATGGCTTGTCCAGACTCATAGGAATCGTATGCACTGGTCTTCAGCTTGGGTCAAGTCACATTTTACAGCTGGTCTGAAGACGACCCAGTTAAGTGAGTCTTTCAATGCTTTTCTTCGTGGATTTTTGCAGCCAGACCATTCACTTGTTCAATTCTTTAGTCATTTCAACGTTATGGTTCAGAGGATGAGGGATAATCATGCTGAGTTGGACTTCAAGGCTGCTAACACTAGAACAAGGAATAATTACCCCAACAGTCAACTGATGCGGTCCGTTGTAAAGAAGTACACACCAGCTTCTTTTGCATTTATCCACAGGCAATATGACCTTTCCTTCAAATACTATTATCAAGAGGACACATCAAAAGGGTCTGAGTTAAATAAGTTTTTCAAAGTGTTCACAATTGAAAAGGTTGATGATCCTGATGAAGTAGATGATCATAATGATGATGATGCTCATAATGATAATGGTGGGGCTTCAAATTCTGATGAATTTCAAGAAATTATCCCGAGTTTCGAAGAGCTTGATCGACTTGATGAGAGGGTTGTCACAGTTGACATTAGGAGCAAAAGTTTTAGTTGCACATGTCGTATGTTTGAGAACAGGGGATTCTTATGTCGACATGTTTTCAAAATCTTGGAGTTCTTGGGTGGTTCTGTGCAATATCATTGTTTGAAGACAATACCTGCACAATATATTTTGAAGCGTTGGACTAGAGATGTGCGTCCGTCTGTCGATAAGCTGAAATCTTCCATCACTATTGGCACTGAAGACACCACCCAAGCACAACGATATCAACAAATTTGTGTTGTTACAGTTCAGCTTTCTACGCGTGTTTGTGAAGATGAGGAGGCTTCTAAAATTTTTCTTGATGGTGTTATTGAAGCTGGGAAAAAGGCAGAGGAGTTACTTTTTTCTAAAGGTATCGGTACAAACCCGTCGTCAGTGACGCCATCTAAGTCTTCAAAAGCAATTGTTGTTGTTGGTGAACCATCTTCCGGGAAGTCCACTGCACCAAAGTTCAAAGAAAGACCAAATCCAATTAAGTCAAAGAAACGACTTAAAAGTGATTATGAAAAAGCTAGAGAAAGACAGAAACTCATTATGGAGCGAAAGAAACAAAAGAGAGAAGATGAGGAAGCTTTAAAGAAAAAAAGTGCAGTAGGAGAAATGCAAGAGCAGCAGTAA 2469 0.3852 MDLTSTSSGIGDILSTEASGSEPLTSSDSSQCCHPDIKKSWDTLVFHSIKEVEDFYGQYAYKTGFSIRSMLKSKNNSKNKKSDKIHYLRYVCNKEGFKKGSLLNPNNKPRSDSPVVIEFEKVKERPEERVGCKAGIYLKLDETLNVYKIYRWEGTHCHELHRKEHHRYLRSFREVNEVQGQLALINSKAGMSMRTSYEVMGQGVGGTENLPFRFSDLKNYLMTIRSKEMIRGEATVIQEFFRNEAMSKPSFYYDMQVDAAEDIASIFWADGIMQLDYSLFGDVVSFDTTYRTNNQYRPLAAFLGFDNHRKSVLFGAALLYDETAATFDWLFTTFLKCMSNKKPQTIYTDQATALLKSVPNIFQGVFHGLCSWHMSENAKKNLGTRANSSFFDELTILISNVEDESDFDYNWDRMMKNCFDGRPISDWTWLVQTHRNRMHWSSAWVKSHFTAGLKTTQLSESFNAFLRGFLQPDHSLVQFFSHFNVMVQRMRDNHAELDFKAANTRTRNNYPNSQLMRSVVKKYTPASFAFIHRQYDLSFKYYYQEDTSKGSELNKFFKVFTIEKVDDPDEVDDHNDDDAHNDNGGASNSDEFQEIIPSFEELDRLDERVVTVDIRSKSFSCTCRMFENRGFLCRHVFKILEFLGGSVQYHCLKTIPAQYILKRWTRDVRPSVDKLKSSITIGTEDTTQAQRYQQICVVTVQLSTRVCEDEEASKIFLDGVIEAGKKAEELLFSKGIGTNPSSVTPSKSSKAIVVVGEPSSGKSTAPKFKERPNPIKSKKRLKSDYEKARERQKLIMERKKQKREDEEALKKKSAVGEMQEQQ* 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1151 822 Pfam FAR1 DNA-binding domain 54 161 IPR004330 -
Tpr7g1151 822 MobiDBLite consensus disorder prediction 769 814 - -
Tpr7g1151 822 SMART 26again6 619 646 IPR006564 GO:0008270
Tpr7g1151 822 ProSiteProfiles Zinc finger SWIM-type profile. 610 644 IPR007527 GO:0008270
Tpr7g1151 822 MobiDBLite consensus disorder prediction 756 822 - -
Tpr7g1151 822 Pfam MULE transposase domain 283 377 IPR018289 -
Tpr7g1151 822 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 46 717 IPR031052 GO:0006355
Tpr7g1151 822 Coils Coil 778 798 - -
Tpr7g1151 822 PANTHER OS03G0181600 PROTEIN 46 717 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1151 Tpr-Chr7 11424778 11428563 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr7g1151 FAR1 9.9e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1151 - - mtr:MTR_0558s0020 483.026