Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1145 ATGGCAGCTATGATGGATTTTTACAGTAACACACAGTTTCATAACTCAGATCCATTTAGAGGTGAATTAATGGAAGTTCTTGAACCTTTTATCAAAAGTCCTTCAGTTTCAACCTCAACCTCAACCTCAACACAATCACCCTCATATTCTTCTCCTTTTCTACCTTCTATCTCTTCTCTTCCTCCTCTTTATACTGATGGTTGTTATAGCCAAAACTTCGTAGGCTTTACTCAACCATCTTCAACTTCTTCTTCTCTTCTTGGTCTTAATCACTTAACCCCATCTCAAATCAACCAGATCCAAGCTCAAATCCAACAACAAAACTTTACCTTACTGCAACAGCAACAGCAACATCAACAACAACAACAACAACGTCTTGGTAATACTCTGAGTTTTCTCAGTCCAAAACCGATCTCTATGAAGCAAGTGGGTAATAATCTTTCAAAACCCACGAAGCTATACAGAGGGGTGAGGCAAAGGCACTGGGGAAAATGGGTTGCTGAGATAAGACTACCAAAGAATCGTACTAGGCTTTGGCTTGGTACTTTTGATACAGCTGAAGAAGCTGCTTTGGCTTATGATAAAGCTGCTTATAAGCTTCGTGGTGACTTTGCTAGGCTTAATTTCCCAAATCTTAAACACCAAGGTTCTTCTATTGGTTGTGAGTTTGGTGAGTTTAAGCCTCTTCCTTCTTCTGTTGATGCTAAACTTCAAGCTATTTGTGAAGGTTTAGCTGAGATGCAGAAACAGGGGAAGACAAAGACAGAGAAACCTAAGAAAACACCTGCAGCGAGGTCTAAAGTTAAGGCGGCGACGACAGCGGCTTCTTCGTCGGAGACAGTGACTGTGGTTGAGGATTCTGTTGTTGATTTGAAGAAGGGTGGTTCAGAGGGTTGTTGTAAGGTCGAAGTTTCGTCTTCTCCGGTGAGTGAAGGTGGTTCTTCTGAAGGATCTTCACCACTTTCGGATCTTACTTTTGGTGATGTTGGTGAGCCACAGTGGGAGGGTGATTTAGATAATTTTAATTTGCTAAAATACCCCTCTTATGAGATTGATTGGGATTCTCTGTGA 1071 0.4136 MAAMMDFYSNTQFHNSDPFRGELMEVLEPFIKSPSVSTSTSTSTQSPSYSSPFLPSISSLPPLYTDGCYSQNFVGFTQPSSTSSSLLGLNHLTPSQINQIQAQIQQQNFTLLQQQQQHQQQQQQRLGNTLSFLSPKPISMKQVGNNLSKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDKAAYKLRGDFARLNFPNLKHQGSSIGCEFGEFKPLPSSVDAKLQAICEGLAEMQKQGKTKTEKPKKTPAARSKVKAATTAASSSETVTVVEDSVVDLKKGGSEGCCKVEVSSSPVSEGGSSEGSSPLSDLTFGDVGEPQWEGDLDNFNLLKYPSYEIDWDSL* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1145 356 PRINTS Ethylene responsive element binding protein signature 154 165 IPR001471 GO:0003700|GO:0006355
Tpr7g1145 356 PRINTS Ethylene responsive element binding protein signature 176 192 IPR001471 GO:0003700|GO:0006355
Tpr7g1145 356 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 4 355 - -
Tpr7g1145 356 Gene3D AP2/ERF domain 153 211 IPR036955 GO:0003700|GO:0006355
Tpr7g1145 356 MobiDBLite consensus disorder prediction 307 322 - -
Tpr7g1145 356 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-4 4 355 - -
Tpr7g1145 356 MobiDBLite consensus disorder prediction 302 330 - -
Tpr7g1145 356 Pfam AP2 domain 154 202 IPR001471 GO:0003700|GO:0006355
Tpr7g1145 356 SMART rav1_2 153 216 IPR001471 GO:0003700|GO:0006355
Tpr7g1145 356 CDD AP2 152 212 IPR001471 GO:0003700|GO:0006355
Tpr7g1145 356 SUPERFAMILY DNA-binding domain 153 210 IPR016177 GO:0003677
Tpr7g1145 356 ProSiteProfiles AP2/ERF domain profile. 153 210 IPR001471 GO:0003700|GO:0006355
Tpr7g1145 356 MobiDBLite consensus disorder prediction 248 276 - -
Tpr7g1145 356 MobiDBLite consensus disorder prediction 249 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1145 Tpr-Chr7 11339458 11341434 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1145 1 356 AP2-EREBP Transcription Factor Family AT1G78080 50.400 1.28e-95 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Tpr7g1145 AP2 8.2e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1145 K09286 - gmx:100800478 331.257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g1145 7 11339458 11341434 Tpr7g1145 7 11339458 11341434 ECH