Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1129 ATGACTTCATTTCCTTCTGATTCTTTCAACATGAGAGTCACAGAAGATGGAAATCTTCATCTTGAAGATACAGAGAGGTCACAGTGGATAATAAACTCTCCAAATCCACCACCTCTATGGAAAAAGCTTATTACTTCACTCAAGAATAATAAGTTTTTTTCTTCATCTAAGAAGAAAACAACTTGCCATGAAAATGCTTTTTCTTTCTTTAGTAGTTTATTTCCAATCCTTGGTTTGTTCAAAAACTATGATGCTTTCAAGTTTAAAGATGATTTACTAGCTGGTTTGACTCTTGCTAGCTTAAGCATACCTCAGAGTATTGGATATGCTAATTTAGCAAAACTTGATCCTCAATATGGCTTATACACAAGTGTGGTTCCTCCTCTTATCTATGCTGTGATGGGGAGTTCAAGAGAAATTGCAATTGGACCTGTAGCTGTAGTGTCACTGCTGCTATCAACCCTTTGTCACAAAGTGGTTGATCCAGAGTTAAATCATGATGATTACAGAAATTTTGTTTTTACTGTAACATTATTTGCTGGAATCTTTCAAGTTGCATTTGGAGTTTTCAGGTTGGGATTTCTTGTGGATTTTCTGTCACATGCAGCACTTGTTGGTTTCATGGCTGGTGCAGCCATCATGATTGGTCTTCAACAGCTTAAAGGGTTGCTTGGGATTAGTAACTTTACCAATAAATCTGATGTTGTTTCTGTTTTGGAATCTGTTTATAAATCACTCCATCACCAAATTCCATCTGGAGAATGGTACCCTCTGAATTTTGTCATTGGAAGTTCATTCCTGATTTTCCTTTTGATTGCAAGATTTATGGGCAAGAAAAACAAAAAGCTATTCTGGTTGCCAGCTATTGCTCCTCTTGTATCAGTTATATTATCAACTTTTATTGTGTATATATCCAAAGCTGATAAGAATGGGGTTAATATAGTAAAACATGTCAAAAGAGGCCTTAATCCAAGCTCAATTCATCAATTACAACTCAATGGTGAACATGTTGGACAAGCAGCTAAAATTGGATTCATTTCTGCTGTTATTGCTCTCACTGAAGCAATGGCTGTTGGTAGATCTTTTGCTTCAATTAAAGGATACCATCTTGATGGAAACAAAGAAATGTTAGCAATGGGTTGTGGGAACATTGCAGGATCATTCACTTCATGCTATGTTGCAACAGGTTCATTTTCAAGGACTGCAGTAAATTTCAGTGCAAGATGTCAATCATCAATATCAAATATTGTGATGGCAGTGACAGTGATTCTGTGCTTGGAATTGTTTACAAGACTGTTATATTACACACCTATGGCTATACTAGCTTCTATAATCCTCTCTGCTCTTCCAGGATTAATTGACATTAGAGAAGCTTGTTATATATGGAAGGTTGACAAGTTTGACTTTTTTGCTTGCATTGGTGCTTTCTTTGGTGTCTTGCTTGTATCCGTAGAAACTGGTCTTCTTGTGGCTGTGTCAATTTCGTTTTTAAAGATAATAATACAATCAATTAGACCTGGAATAGAAGTTCTAGGTAGAATTCCAACAACACAAGCCTTCTGTGATATTAGTCAATATCCCATGGCTACAACCACTCCAGGCATCTTGGTTCTTCGTATAAGTTCTGGCTCACTCTGCTTTGCAAATGCTAATGTTGTTAGAGAAAGAATACTCAAATGGGTCACTCATGAAGATGGACTTAAAGAAACTACTAAGGGAAATGTCCAAGCAATAATATTGGATATGACTAATTTGATGAATGTTGATACTTCTGGAATTATAGTACTGGAGGAATTGTACAAGAGGTTACTCTCTCGTGGCATAAAATTTGCTATGGTGAACCCAAGGTGGCTAGTAATTCACAAGCTTAAAGTGGCACACTTTGTAGATAAAGTTGGGAAAGAATGGGTTTTCTTTACTGTTGCTGAAGCTGTGGATGCATGCTTATCTTATAAATTTGCTAATCCATGA 1971 0.3643 MTSFPSDSFNMRVTEDGNLHLEDTERSQWIINSPNPPPLWKKLITSLKNNKFFSSSKKKTTCHENAFSFFSSLFPILGLFKNYDAFKFKDDLLAGLTLASLSIPQSIGYANLAKLDPQYGLYTSVVPPLIYAVMGSSREIAIGPVAVVSLLLSTLCHKVVDPELNHDDYRNFVFTVTLFAGIFQVAFGVFRLGFLVDFLSHAALVGFMAGAAIMIGLQQLKGLLGISNFTNKSDVVSVLESVYKSLHHQIPSGEWYPLNFVIGSSFLIFLLIARFMGKKNKKLFWLPAIAPLVSVILSTFIVYISKADKNGVNIVKHVKRGLNPSSIHQLQLNGEHVGQAAKIGFISAVIALTEAMAVGRSFASIKGYHLDGNKEMLAMGCGNIAGSFTSCYVATGSFSRTAVNFSARCQSSISNIVMAVTVILCLELFTRLLYYTPMAILASIILSALPGLIDIREACYIWKVDKFDFFACIGAFFGVLLVSVETGLLVAVSISFLKIIIQSIRPGIEVLGRIPTTQAFCDISQYPMATTTPGILVLRISSGSLCFANANVVRERILKWVTHEDGLKETTKGNVQAIILDMTNLMNVDTSGIIVLEELYKRLLSRGIKFAMVNPRWLVIHKLKVAHFVDKVGKEWVFFTVAEAVDACLSYKFANP* 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1129 656 Gene3D STAS domain 505 650 IPR036513 -
Tpr7g1129 656 PANTHER SLC26A/SULP TRANSPORTER-RELATED 15 655 - -
Tpr7g1129 656 Pfam Sulfate permease family 88 473 IPR011547 GO:0016021
Tpr7g1129 656 Pfam STAS domain 526 644 IPR002645 -
Tpr7g1129 656 PANTHER SULFATE TRANSPORTER 15 655 IPR001902 GO:0015301|GO:0016020|GO:0055085
Tpr7g1129 656 SUPERFAMILY SpoIIaa-like 530 648 IPR036513 -
Tpr7g1129 656 ProSitePatterns SLC26A transporters signature. 117 138 IPR018045 GO:0008271|GO:0008272
Tpr7g1129 656 ProSiteProfiles STAS domain profile. 542 648 IPR002645 -
Tpr7g1129 656 CDD STAS_SulP_like_sulfate_transporter 526 641 - -
Tpr7g1129 656 TIGRFAM sulP: sulfate permease 75 644 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1129 Tpr-Chr7 11093938 11099504 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1129 22 652 Inorganic Solute Cotransporters AT5G10180 60.876 0.0 790
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1129 K17469 - gmx:100805269 1025