Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1128 ATGTCGTCGTGGAATAATAATTCTCCGTGTGCAGCGTGCAAGATTCAGCGAAGAAAATGCACACAAGAATGTATTTTTGCACCATATTTTCCGCCAGATAATCCTCAAAAATTTGCTTATGTACACAAAGTCTTTGGCGCTAGTAACGTTGCAAAGTTACTCAACGAGGTTAATATTTCACAGCGTGAAGATGCTGTTAAGTCATTAGCTTATGAAGCAGAAGCGCGTTTGAGAGATCCTGTTTATGGTTGTGTTGGTCTTATTTCACATCTTCAGACTAAACTCAGAGACTTGCAAAATGAACTTGTTAATGCCAAGAAAGAACTTGCTTCTTTTCATTCACCACCACAGCCGCCACTGCTTCTGCCGCCGGCTGCGGCGACTGGAAGTTCTTATTTTTCCTTCGGTTCTTCTTCTGCTCAACAGCGTCATCATGAGATTTTCAACTTCAGCGGTAATAATAATAATATTAATAACTCATTTTCTAGCTTTCAAATGCACCCTTTTCAGAATCAGTTGATGATTTCATCATCATCATCATCACAGCCACAAACACAAATCCATAACCAGTTTTTCTCAAAGAAGATGTTGAAGGAAGAAAGACAGAATCTTGATTAG 618 0.3916 MSSWNNNSPCAACKIQRRKCTQECIFAPYFPPDNPQKFAYVHKVFGASNVAKLLNEVNISQREDAVKSLAYEAEARLRDPVYGCVGLISHLQTKLRDLQNELVNAKKELASFHSPPQPPLLLPPAAATGSSYFSFGSSSAQQRHHEIFNFSGNNNNINNSFSSFQMHPFQNQLMISSSSSSQPQTQIHNQFFSKKMLKEERQNLD* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1128 205 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 6 190 - -
Tpr7g1128 205 Coils Coil 88 108 - -
Tpr7g1128 205 Pfam Lateral organ boundaries (LOB) domain 9 106 IPR004883 -
Tpr7g1128 205 ProSiteProfiles LOB domain profile. 8 109 IPR004883 -
Tpr7g1128 205 PANTHER LOB DOMAIN-CONTAINING PROTEIN 32-RELATED 6 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1128 Tpr-Chr7 11084613 11085230 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1128 5 148 AS2 family AT5G66870 62.252 1.37e-56 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Tpr7g1128 LOB 5.9e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1128 - - gmx:100819170 195.667