Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1112 ATGAACCGTCAAGTTTTACCACCGTTACCGAAAAATGCAAGTTCACTCGAACCTAAAATCTGGAGAGCAATCGCCGGCGCCGCCGTTCAAATCCCCGCCGTTAATTCTAGGGTTTACTACTTCCCTCAAGGTCACATGGACCAAGCTTCATCACTTCCTAACAATCTTTCACCTCAACTACTTTCACGTCCTTACATTCTCTGTTCCGTTTCCGGTGTTCATTTCCTCGCCGATCCGAAAACCGATGAGGTTTTTGCTAAGCTTTTTCTTCAACCTTTGAACGATTTCACCGCTGTTTTTTCTCGTGCTGTTGTTCAGGAAGTTGATGATGGAGAGAGGATTTCTTCGTTTGCGAAGATTCTTACTCCTTCTGATGCTAACAACGGCGGTGGATTTTCCGTTCCGAGGTTTTGTGCTGATTCGATTTTCCCTCCGCTTGATTATTCTATGGACCCGCCGTTTCAGTCTCTTTCGATCACCGATGTTCATGGCTTGACTTGGGAGTTTCGTCACATTTACCGTGGTACGCCGCGGCGACATCTGTTGACTACCGGTTGGAGTAGGTTCGTCAACTGTAAGAAGCTAGTTGCAGGTGATTCTGTTGTTTTTATGAAGAACAATAGAGGTGCAATGTTCGTTGGGATCCGTCGTGCTGTTCGATTTGTTCTGGCTAGAAGTTGCGTCGGCTCTGATGCGACGAGATTGTGTCTTCCGATCTGTGGGGTGAGAAATAGGGTGGATGATGAAGAGGATGAGAAGCTGCTGGAAGAGAAGTGTAGAGAGGGGTTTTCGAGGAACGGGAAAGGGAAGTTGTCGCCGAATTCGGTTACTGTGGCAGCGGAATTGGCGGCTCAGGGCATGGCGTTTGAAGTTGTTTATTATCCGAAAGCCGGTTGGTCAGATTTTGTGTTGAAAGCTGAAGTGGTGGATGCTGCTATGAGTGTTACCTGGTGTCCTGGAATGAGAATCAAAATGGCTGTTGAGACTGATGATTCTTGCAGGACTACTTGGTTTCAGGGTTTAGTGGCTTCAGTCAATGTTCCTGAACATGGAGCTTGGCGAGGTTCCCCTTGGCGCATGCTTGAGATTTCATGGGACGAACCTGAAGTGTCGCAAACTTCCAAGTGGGTCAGCCCTTGGCAGGTCGAACTTCTTTCTACCACACCTTCACTTCATAGACCATTTCCCGCAATGAAAAGGATTAGAGTGGGTTCTGGGGTGTTAACTGATGGAGATGGAGACCCCTTTTCTATCACCGGATTCAATAATTCAACAATGGGACAATTGAGTCAAGAATTGTTGAATTACGGAACTTTACCTGCTGGCATGCAGGGAGCCAGGCATGATCTATTTTCTGTTTCAAGTTTTTCCAATTTTCCAGGTGATAACTCCCGTCTGTGTATGGGTAACACCTTTAGCAACAACTCGGTGCCAGGGTTGAAATCTTTGTCAACTGAGCTAAATGTTGGCAGTTCTCAATCTAGTGATTTTTCACCAGAGAGCCAGAGTAGTTTGCGTTCCTTTGGCACAGATTTTGTTCGGAACCTCAACTGCAACTCAATGAAACCCGGGCCTGTATCGTTTCAGCTATTTGGTGCAGTCATTCAGACCGAACAGCCTGTTGAAAGTGGTTCACATGGTACTGGTAGCTCAGGAGATGATAGTAGTAAGGGCTGCAATGACACTGAAGGCATTAACAATGCTCTTGAGGATTCTTTTACTTACTCGAAATTGCTTGGCAGGCTTGATGGTCAGTGCCAAATTGCCTCAACTGTTGAGGCATGCTATTTGTGA 1794 0.4643 MNRQVLPPLPKNASSLEPKIWRAIAGAAVQIPAVNSRVYYFPQGHMDQASSLPNNLSPQLLSRPYILCSVSGVHFLADPKTDEVFAKLFLQPLNDFTAVFSRAVVQEVDDGERISSFAKILTPSDANNGGGFSVPRFCADSIFPPLDYSMDPPFQSLSITDVHGLTWEFRHIYRGTPRRHLLTTGWSRFVNCKKLVAGDSVVFMKNNRGAMFVGIRRAVRFVLARSCVGSDATRLCLPICGVRNRVDDEEDEKLLEEKCREGFSRNGKGKLSPNSVTVAAELAAQGMAFEVVYYPKAGWSDFVLKAEVVDAAMSVTWCPGMRIKMAVETDDSCRTTWFQGLVASVNVPEHGAWRGSPWRMLEISWDEPEVSQTSKWVSPWQVELLSTTPSLHRPFPAMKRIRVGSGVLTDGDGDPFSITGFNNSTMGQLSQELLNYGTLPAGMQGARHDLFSVSSFSNFPGDNSRLCMGNTFSNNSVPGLKSLSTELNVGSSQSSDFSPESQSSLRSFGTDFVRNLNCNSMKPGPVSFQLFGAVIQTEQPVESGSHGTGSSGDDSSKGCNDTEGINNALEDSFTYSKLLGRLDGQCQIASTVEACYL* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1112 597 MobiDBLite consensus disorder prediction 539 563 - -
Tpr7g1112 597 PANTHER AUXIN RESPONSE FACTOR 12 596 - -
Tpr7g1112 597 SUPERFAMILY DNA-binding pseudobarrel domain 114 221 IPR015300 -
Tpr7g1112 597 ProSiteProfiles B3 DNA-binding domain profile. 117 219 IPR003340 GO:0003677
Tpr7g1112 597 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 12 596 IPR044835 GO:0003677|GO:0006355|GO:0009725
Tpr7g1112 597 SMART B3_2 117 219 IPR003340 GO:0003677
Tpr7g1112 597 CDD B3_DNA 116 217 IPR003340 GO:0003677
Tpr7g1112 597 Pfam Auxin response factor 279 361 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Tpr7g1112 597 Gene3D - 317 390 - -
Tpr7g1112 597 Pfam B3 DNA binding domain 117 218 IPR003340 GO:0003677
Tpr7g1112 597 Gene3D - 114 219 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1112 Tpr-Chr7 10852494 10857843 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1112 12 563 B3 DNA Binding Superfamily AT1G77850 46.996 2.57e-165 483
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Tpr7g1112 B3 9.8e-22 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1112 - - aprc:113852457 671.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g1112 7 10852494 10857843 Tpr7g1112 7 10852494 10857843 ECH