Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1107 ATGCTTTCTTTCCTCTGCACCTTGTTATTGCCGCCGATGACCGGAGAACGATGTTACCGCCGGAAGAATACCACGGAAGAAGGTTCCGCCGCCTTTATACAAGAGATGCCGATGCCCTCTCCGGCCGATATTCCGGCGGTAATTCCGGCCGCGTTGGAGATTGATTACTTCTCGCAGGCGAGGAAAGCGCTTAGCGAACGTTGTCCTTTTGATGTTGCTGAGGAAACGTCGACTTCTGCTGCTGTTACTCTGCCGAGTGGGTTAGCTAGTTTGTTGAACCGTAATGGGGATAACCGGAAGCGCCACAAGAAGTCTCATTCCGGTGTCGGTGATAAAAAGAAGAAATCGTCTAGGGCTAGCGACAAGTTGCGTAGTTTTAATGTTTGGGTTGAGACGGAGGAGTATTTCAGGGACTTGAATTTGTCTGATATTGATACTTTATTGGAAGCTTATTCCTCTTATAGTTTAGCTTCTCGTGAGTGTTTTACAATTCCACAATTTGGAAATGCTACTAGGTTCAATGTAGTTAGTAGTGTGGATGAGAAGAAGCATGCTCCAATATTCAATTTAGTTAGTAGTGAGAATGAGAAGAATGCTGTTGAAGAGGTAAACAACGAGAATGATTCCTTGGGAATTGAGTTAAGTGATGTTGTTGAATTGGAAAAAGCTTTGCCACTTGATGATGATAAGAATTGTGATGCTTCTGATGATTCGTGTGTTAGTTTAGAGTGGTTTTTAGGTAGTAGGAATAGAATTTTTTTAGCTTCTGAGCGCCCATCTAAGAAAAGGAAGCTTTTAGGTGGTGATGCTGGCTTGGAGAAAGTTGTAATGACTAGTCCTTGTGAAGGGGACCAACCTTATTGTCATTATTGCGGCAGTGGAGATTCTGGCACTGATTCCAATCGGTTAATAGTCTGCTCTTCTTGTAAAGTCGCAGTTCATCGGAAGTGCTATGGTATACAAGACAATGTAGACGAGTCTTGGTTGTGTTCTTGGTGTAAGCAAAAGGGCGATGTTGATGACTCGGCGACTCCATGTGTTCTTTGCTCAAAGAAGGGTGGTGCTTTAAAACCAGTTAATAGTGCTGTTGAAGATGATGGGTCTGGCCAGTTTGTGCACCTGTTTTGTTGTCTGTGGATGCCAGAGGTTTATATTGATGATTTGAAGAAGATGGAGCCTATTATGAATGTGGCAGACATCAAGGAAACCAGAAGAAAATTGGTGTGTAATGTTTGCAAATTGAAATGTGGTGCTTGTGTTCGGTGTACTCATGGATCCTGCAGAACTCCTTTCCATCCTTTATGTGCAAGGGATGCTAAACATAGAATGGAAGTTTGGGCAAAGTATGGTATTGATGAGATTGAATTGCGGGCTTTTTGCTCGAAACACTCTGATCTACAAGAGAACAGAAACATCTTGCCATTAGGAGGCTCTGTTGCAGTTGGCAGTGAAATTCCAGAAGCTAATGACCTTTCAGTGACTTTGCCGGTGAAAAGTGAACACGATTTAAAAATTGGTTGCAGCAATGGAGGATTGGAGTCTGATAGTAATCCAGACAAGTTGAACCATAATGATGAAACTCCTAACGGAGGATTGTCTGTCTGTATGATTAGTGCTCAAGATACGTTGGGATGTGGCGCTGCGCCACCACACAATATTGGGGTGGCAGGGAGAAGCAATGAGAATGTTAATGTCTCTGAATCCCCCAGATTTGTACTTGTTTTGAGAAAGTTGATAGATAAAGGGAAAGTTGATGTAAAAGATGTAGCATTGGAGATTGGCATTTCACCAGATACATTAACTGCAAATATCAATGTAATGCTTGAAATTTATCCTGTCCACTTTGTGAAAAATGATTATTTGAACAAAATAAATTTTATTTTTATGCTTCAAACGTTATACTTTCAGGAAGCTTATATGGCCCCTGACATGCAACACAAAATATTCAATTGGCTAAAAGCCCATGTGTATACTGGTGCATCTCATAAAGGCTTAAAAGCCAAATTCAAACCGGCCAATGTATCTATAAATGAAACGGGAGCTTCAGACGGTTCTGATACTTCACCGTTATCTGATTCAGGCTTGCTGGATCCTGTTGCTGTTAATGTTAAGTCTGTACCACCAAGGAGACGAACTATCAATAACATTAGGTTTTTGAAGGATAATAAAGTTATATCTTCATCTGAGGGGGTTACCACTAGTGAGAATGGGGTGTCAATTGATAAGTTCCTAGTTTGTCAGCCTGAGTGTGAAAGTCCAGGACGTTCTGACAAAGCATCAATTCCTGATGCCACTGAAACGAATTTAACCAAGTCTGAGGATATATTTCATGAGGTTCAAGGCAATGCTGATGAGCCCTACAAGTCCAGCTTATCTGTATGTGTTTCAGAAGAGAAGTCTACTGCTTGTTTGCCGAATGCTTCAGATCAGGACTATCCAGCTCATTCTGCTTCAGAACCACCGGTTCCTGGTTTCATAAAAATGGAAGCTATCTCTAGTTACATTCACCCTTACATTAACAAGAAATTGCTGCAGATTCGTGATGGCTTGCCCTCAGAGGATCTTATGGCAGGTTTAAGTGGCTACAGAAATTCTTTGATTGAATCCTCTGGAGCTAATAGCTGCTCAAGTAGTGAAAACCAGCAATTAATTTGCACTGACGTTTCCAAGGCTGATCAAGTAAAGATGGAGCAGTTGGATAGAAATGAGTTGGAGGGGGAACTTATATATTTTCAGAATAGGCTGCTGCAGAAAGCAGTTGCAAAAAACAGGCTTACTGAAAACTTGGTCTACAATGTTGCCAAGATTCTGCCTCAGGAGATTGATAAAACACATCAACAAAGATGGGATGCTGTGATTGCTAATCAATATCTGTGTGATCTTAGGGAGGCGAAGAAACAGGGTAGAAAAGAAAAAAAGCACAAGGAAGCACAGGCAGTATTGGCTGCTGCAACTGCAGCAGCAGCATCATCTTCTAGGGTTTCTTCTTTCCGTAAAGATACCATAGATGAATCTTTGCAACAGAATTCATTAAAGTTGGATGCTTTAAGTGGGCGGACTGGTGCATGTTCTCAGCCAATGCCACGTGCCAAAGAGACTCTTTCTAGAGTTGCTGTCACTAGAGCTTCAACAGAGAAATATTCGGATTTTTCTCTGCCAAGCTCAGATTTTTCTAAGGTGCAACGTAAATCATGTGATATCTGCAGACGCTTTGAGAATATGTTAAATCCTATCCTAGTCTGCTCTGGTTGCAAGGTTGCAGTGCACTCAGTTTGCTATCGCAGTGTGAAGGAAACAACAGGTCCATGGTACTGTGAATTATGTGAAGATCTATTGTCCAGAAGTTCAGGTACACCTGATATAAATAGCTGGGAGAAGCCTTACTTTGTTGCAGAATGTGCTCTCTGTGGTGGTACTACTGGTGCTTTTAGGAAGTCATCTGATGGTCAATGGGTTCATGCCTTCTGTGCCGAGTGGCTTTTTGAGTCTACATTCAGAAGAGGACAGACAGATATTATTGAAGGAATGGGGACTGTGCCAAAAGGAGTTGATATTTGTTGCATCTGCCACCGCAGGCATGGTGTATGTATGAAGTGTTGCTATGGCCATTGCCTGACCACATTCCATCCATCATGTGCTAGAAGTGCTGGTTTGTTCATGATTGTGAGGACTGCTGCTGGGGGAAAGATTCAACACAAGGCTTACTGTGAAAAGCATAGTTCGGAGCAGAGAGCAAAGGCTGAAAATCAAAATCATGGAGTTGAAGAGTTAAAAAGTATCAAGCAAATTAGGGTTGAACTTGAGAGATTACGCCTCCTTTGTGAAAGAATTGTCAAACGGGAAAAGATAAAGCGGGAATTGGTTCTATGCTCACATGACATACTAGCCTTTAAAAGAGATCATGTGGCTAGGTCTGTCCTTGTTCATAGTCCTTTCGTCCTTCCAGATGGTAGCTCAGAATCAGCTACAACATCCCTTAAAGCAACCACAGAGGGGTACAGATCGTGCAGTGAAGCTCTCCAAAGATCAGATGATGTTACTGTGGATAGCTCAGTTTCTGCTAAGCACCGTGTCAGAGTTGCCGTATCCATGGACACAGACCCAAAATTGGATGATGACTGCTCTACCTCACAAAGTCACTATAACCACAAGATTCCAGAGAAGCAATTTTCTGGCAAACAGATTCCTCGTAGAGCTTCGGCTACATCACGCAATATCTCTGAGGAGGACGGATGGAGATCCAAATCTCGAAAGTTACAGGCTACTGAAACATTTGGAAAAGAGCTTGTTATGACATCAGATGAAGCATCTATGAAGAATTCAAGGCTACCTAAAGGATATGCATATGTTCCTGCAGATTGCCTGTCAAATGACAAACAGTCTAACGAGGATGTATATGCTAGTGGACAAGGGGAACATGACAGGTAG 4428 0.4221 MLSFLCTLLLPPMTGERCYRRKNTTEEGSAAFIQEMPMPSPADIPAVIPAALEIDYFSQARKALSERCPFDVAEETSTSAAVTLPSGLASLLNRNGDNRKRHKKSHSGVGDKKKKSSRASDKLRSFNVWVETEEYFRDLNLSDIDTLLEAYSSYSLASRECFTIPQFGNATRFNVVSSVDEKKHAPIFNLVSSENEKNAVEEVNNENDSLGIELSDVVELEKALPLDDDKNCDASDDSCVSLEWFLGSRNRIFLASERPSKKRKLLGGDAGLEKVVMTSPCEGDQPYCHYCGSGDSGTDSNRLIVCSSCKVAVHRKCYGIQDNVDESWLCSWCKQKGDVDDSATPCVLCSKKGGALKPVNSAVEDDGSGQFVHLFCCLWMPEVYIDDLKKMEPIMNVADIKETRRKLVCNVCKLKCGACVRCTHGSCRTPFHPLCARDAKHRMEVWAKYGIDEIELRAFCSKHSDLQENRNILPLGGSVAVGSEIPEANDLSVTLPVKSEHDLKIGCSNGGLESDSNPDKLNHNDETPNGGLSVCMISAQDTLGCGAAPPHNIGVAGRSNENVNVSESPRFVLVLRKLIDKGKVDVKDVALEIGISPDTLTANINVMLEIYPVHFVKNDYLNKINFIFMLQTLYFQEAYMAPDMQHKIFNWLKAHVYTGASHKGLKAKFKPANVSINETGASDGSDTSPLSDSGLLDPVAVNVKSVPPRRRTINNIRFLKDNKVISSSEGVTTSENGVSIDKFLVCQPECESPGRSDKASIPDATETNLTKSEDIFHEVQGNADEPYKSSLSVCVSEEKSTACLPNASDQDYPAHSASEPPVPGFIKMEAISSYIHPYINKKLLQIRDGLPSEDLMAGLSGYRNSLIESSGANSCSSSENQQLICTDVSKADQVKMEQLDRNELEGELIYFQNRLLQKAVAKNRLTENLVYNVAKILPQEIDKTHQQRWDAVIANQYLCDLREAKKQGRKEKKHKEAQAVLAAATAAAASSSRVSSFRKDTIDESLQQNSLKLDALSGRTGACSQPMPRAKETLSRVAVTRASTEKYSDFSLPSSDFSKVQRKSCDICRRFENMLNPILVCSGCKVAVHSVCYRSVKETTGPWYCELCEDLLSRSSGTPDINSWEKPYFVAECALCGGTTGAFRKSSDGQWVHAFCAEWLFESTFRRGQTDIIEGMGTVPKGVDICCICHRRHGVCMKCCYGHCLTTFHPSCARSAGLFMIVRTAAGGKIQHKAYCEKHSSEQRAKAENQNHGVEELKSIKQIRVELERLRLLCERIVKREKIKRELVLCSHDILAFKRDHVARSVLVHSPFVLPDGSSESATTSLKATTEGYRSCSEALQRSDDVTVDSSVSAKHRVRVAVSMDTDPKLDDDCSTSQSHYNHKIPEKQFSGKQIPRRASATSRNISEEDGWRSKSRKLQATETFGKELVMTSDEASMKNSRLPKGYAYVPADCLSNDKQSNEDVYASGQGEHDR* 1476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1107 1475 MobiDBLite consensus disorder prediction 97 111 - -
Tpr7g1107 1475 ProSitePatterns Zinc finger PHD-type signature. 288 333 IPR019786 -
Tpr7g1107 1475 Coils Coil 1260 1280 - -
Tpr7g1107 1475 PANTHER PHD-FINGER DOMAIN CONTAINING PROTEIN FAMILY-RELATED 234 469 - -
Tpr7g1107 1475 PANTHER PHD-FINGER DOMAIN CONTAINING PROTEIN FAMILY-RELATED 869 1466 - -
Tpr7g1107 1475 SUPERFAMILY FYVE/PHD zinc finger 1053 1110 IPR011011 -
Tpr7g1107 1475 PANTHER PHD FINGER PROTEINS 869 1466 - -
Tpr7g1107 1475 PANTHER PHD FINGER PROTEINS 234 469 - -
Tpr7g1107 1475 Pfam PHD-zinc-finger like domain 345 463 - -
Tpr7g1107 1475 Pfam PHD-zinc-finger like domain 1132 1239 - -
Tpr7g1107 1475 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1130 1242 IPR013083 -
Tpr7g1107 1475 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 340 466 IPR013083 -
Tpr7g1107 1475 CDD ePHD 1133 1239 - -
Tpr7g1107 1475 ProSiteProfiles Extended PHD (ePHD) domain profile. 343 464 IPR034732 -
Tpr7g1107 1475 MobiDBLite consensus disorder prediction 93 118 - -
Tpr7g1107 1475 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1041 1116 IPR013083 -
Tpr7g1107 1475 MobiDBLite consensus disorder prediction 1375 1419 - -
Tpr7g1107 1475 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 277 339 IPR013083 -
Tpr7g1107 1475 ProSiteProfiles Zinc finger PHD-type profile. 1062 1111 IPR019787 -
Tpr7g1107 1475 ProSitePatterns Zinc finger PHD-type signature. 1065 1108 IPR019786 -
Tpr7g1107 1475 Coils Coil 193 213 - -
Tpr7g1107 1475 ProSiteProfiles Zinc finger PHD-type profile. 285 336 IPR019787 -
Tpr7g1107 1475 SUPERFAMILY FYVE/PHD zinc finger 277 338 IPR011011 -
Tpr7g1107 1475 SMART PHD_3 1064 1109 IPR001965 -
Tpr7g1107 1475 SMART PHD_3 287 334 IPR001965 -
Tpr7g1107 1475 SMART PHD_3 408 464 IPR001965 -
Tpr7g1107 1475 SMART PHD_3 1185 1240 IPR001965 -
Tpr7g1107 1475 Pfam PHD-finger 1076 1109 - -
Tpr7g1107 1475 Pfam PHD-finger 301 334 - -
Tpr7g1107 1475 ProSiteProfiles Extended PHD (ePHD) domain profile. 1130 1240 IPR034732 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1107 288 471 C2H2 Transcription Factor Family AT3G14740 29.412 5.97e-17 82.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Tpr7g1107 zf-HC5HC2H_2 9.7e-23 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1107 - - gmx:100775631 1931.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g1107 7 10780685 10792614 Tpr7g1107 7 10780685 10792614 ECH