Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1100 ATGATTTTCGATTATTATAGCAACATAACTAACGCCATGGATTCTAAGAAGCTTAGAAGAAAACCTAAACTCGAGCGTCGTAATGCTCTCAAGTACTTCGATTACGACGCTGGATCGTCTTCTTCTTCTTCTTCGTTTGATGATTCTTCTGGTTCACTTTATACTCGTTCCATGGAGTTGTATGATCGTACTAGCTTCCGTATTGAAGGAATTGAAGGCGAGTTAGATCGAATTTGTAAGAGTTTAGGACTTTCTGGACCTGAAGATTTTGCAATTCCTGCTGCTGCTTGGGAAGCTATGAAGTTTCGATCGTCTTCAGATATTCTTCCCAGTTTGAAGATCGAGGAGCTGAAGGAGGAGGATGAATTGAGTGAGAAATGTGAAGATAGGGATAGTGTTAGGGTTAATGATGAGGTTGCTGAGACTGTTGTTGTTGGTAGTGGTGGTGGTGGTATCAATGGAATTCGTCCACCTATGATTAAGCCGCCACCGGGGATGAGAGTTCGGGTTGTTGATAACACGTGTTCAACTTGGGACCTTTTGAAGGAATTGGCTCCAGTGGTGGAAGGGGAAGAAGGGGTTTTCAACAGGGAAATGGTGGAGAAAGAAAGTGAGGAAGTTGATAGGGTAAGTCCTAAGAGAGAGGAGGAAGATGTGGTGGTGGATAATGTGGCAATGATTGCTGAGATTGTTGATGGTCTTTCGGATTTTAGTACTTCGAATGAAGATGATTCTTCTAGCACTGGCACGGAACCTAGGTCTAATAATGTATCTCCTAATGGGAGAATTAAGCGGATTATTACCCCTGGATGCTGGCAAAAGGGCGAGTTTTTAGGGGGTGGTTCGTTTGGATCTGTTTATGAAGGAATTTCTGACGATGGAATCTTTTTTGCGGTAAAAGAAGTTTCACTGCTTGATCAAGGGGATCAGGGAAAACAAAGTGTCTATCAACTAGAGCAGGAAATTGCACTTTTGAGTCGTTTTGAACATGACAATATAGTTCAATACTATGGCACTGAAATGGATGAATCCAAGCTGTATATCTTTATTGAGCTTGTGACCAAAGGTTCTCTTAGAAACCTCTATCAGAGGTATACTCTTCGAGATTCCCAAGTATCTGCCTATACAAGACAAATTCTGCATGGTTTGAAGTATCTTCATGATCAAAATGTAGTTCACAGGGACATCAAATGTGCAAATATATTGGTGCACGCAAGTGGATCTGTCAAACTTGCAGATTTTGGGTTAGCAAAGGCAACCAAATTGAATGATGTTAAATCGTGCAAGGGGACAGCATTCTGGATGGCGCCTGAGGTTGTGAAAGGAAAAAACAAAGGTTACGGGCTTCCAGCTGATGTTTGGAGTCTGGGATGCACTGTGCTGGAGATGCTTACAGGCGAAATTCCATACTCCAATTTAGAATGTATGCAGGCAATATTTAGAATTGGAAAAGGTGAGCCACCTCCTATTCCTGACACTCTTTCAAGAGATGCAAAGGATTTTATCTTGCAGTGCCTTCAAGTTAATCCCGATAATCGTCCTACTGCTGCTCAACTCTTAAACCATCCATTTCTCCAAAGGCCACTTTCCCAGTCTTCATCTCCTTACGTTCATGGCAGAAGAGGTTAA 1629 0.4211 MIFDYYSNITNAMDSKKLRRKPKLERRNALKYFDYDAGSSSSSSSFDDSSGSLYTRSMELYDRTSFRIEGIEGELDRICKSLGLSGPEDFAIPAAAWEAMKFRSSSDILPSLKIEELKEEDELSEKCEDRDSVRVNDEVAETVVVGSGGGGINGIRPPMIKPPPGMRVRVVDNTCSTWDLLKELAPVVEGEEGVFNREMVEKESEEVDRVSPKREEEDVVVDNVAMIAEIVDGLSDFSTSNEDDSSSTGTEPRSNNVSPNGRIKRIITPGCWQKGEFLGGGSFGSVYEGISDDGIFFAVKEVSLLDQGDQGKQSVYQLEQEIALLSRFEHDNIVQYYGTEMDESKLYIFIELVTKGSLRNLYQRYTLRDSQVSAYTRQILHGLKYLHDQNVVHRDIKCANILVHASGSVKLADFGLAKATKLNDVKSCKGTAFWMAPEVVKGKNKGYGLPADVWSLGCTVLEMLTGEIPYSNLECMQAIFRIGKGEPPPIPDTLSRDAKDFILQCLQVNPDNRPTAAQLLNHPFLQRPLSQSSSPYVHGRRG* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1100 542 SUPERFAMILY Protein kinase-like (PK-like) 261 530 IPR011009 -
Tpr7g1100 542 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 61 537 - -
Tpr7g1100 542 ProSiteProfiles Protein kinase domain profile. 272 525 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g1100 542 ProSitePatterns Serine/Threonine protein kinases active-site signature. 391 403 IPR008271 GO:0004672|GO:0006468
Tpr7g1100 542 SMART serkin_6 272 525 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g1100 542 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 61 537 - -
Tpr7g1100 542 Pfam Protein kinase domain 273 525 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g1100 542 ProSitePatterns Protein kinases ATP-binding region signature. 278 300 IPR017441 GO:0005524
Tpr7g1100 542 MobiDBLite consensus disorder prediction 236 260 - -
Tpr7g1100 542 Gene3D Transferase(Phosphotransferase) domain 1 271 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1100 Tpr-Chr7 10700514 10711954 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1100 23 529 MAP Kinase Kinase Kinase AT4G08500 50.871 2.80e-164 478
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Tpr7g1100 Pkinase 2.4e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1100 K13414 - gmx:100819999 767.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g1100 7 10700514 10711954 Tpr7g1100 7 10700514 10711954 ECH