Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1070 ATTGGTACTTTGTGTTCACAGGTAAAGGGGCTTTCGTCGCAAGAATTTGCTGCCCGTAATGATTTGGTTCTTTCATTGCCAGAGAGGATCCAAGCTATCCCGGATGGGACCCTTGCTGCACCCAAACAAACTGGAGGTTGTGGAGCTTCTGCCTCACGTCCTGAAATTAAATTTGATTCAGATGGATACTTTGAACAAACCAAAGAATCAAGTCAGTTTAGGGAGGAGTATGAAATGCCTAAAATGAAACAGGATCAAGGTTTGGATGTGATTGCAGAAGGATTGGATACTTTGAAAAACATGGCACATGATATGAATGAGGAATTTGATAAGCAAGTTCCACTGATGGATGAGATTGACACAAAGGTGGACAAGGCATCCTCTGACCTTAAATATACCAACGTTAAACTTAAAGACACAGTTACCCAGCTACGATCCAGTCGAAACTTCTGTATTGATATTGTTTTGTTGATTATAATTTTGGGAATTGCTGCCTATTTGTACAAGCCCCATCACGCGCAGCTGCTGTTCTAG 534 0.4157 IGTLCSQVKGLSSQEFAARNDLVLSLPERIQAIPDGTLAAPKQTGGCGASASRPEIKFDSDGYFEQTKESSQFREEYEMPKMKQDQGLDVIAEGLDTLKNMAHDMNEEFDKQVPLMDEIDTKVDKASSDLKYTNVKLKDTVTQLRSSRNFCIDIVLLIIILGIAAYLYKPHHAQLLF* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1070 177 CDD SNARE_Qc 83 138 - -
Tpr7g1070 177 PANTHER SYNTAXIN 4 170 IPR045242 -
Tpr7g1070 177 Gene3D - 81 139 - -
Tpr7g1070 177 SUPERFAMILY SNARE fusion complex 71 138 - -
Tpr7g1070 177 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 78 140 IPR000727 -
Tpr7g1070 177 PANTHER SYNTAXIN-73 4 170 - -
Tpr7g1070 177 Pfam SNARE domain 115 164 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1070 Tpr-Chr7 10332510 10334642 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1070 7 168 SNARE and Associated Proteins AT3G09740 72.189 2.76e-86 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1070 K08506 - gmx:100786529 259.996