Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1063 ATGTACATGGAAATGGACATGGACATGGATGCTATCCATGACCTCGACTTCTCCGGACACAGCAGCCTCACAAACACGCCTTCTTCAGATGATGATTACGGTTGCAACTGGAACCAATGGTCTCCCATCGTTAACTGGGACACTTTTGCTGGTGCCCAGGATGGTTTCCACCACCTCATGGACACCATCATTGACGATAGAACCACCCTCCTCGACCAGCTCAGCCCGACCACAACCACCACCACCACAACCACAGAAGAAGAGGAGGAAGAAGAAGAAACAGAAACAACAACAACCACCACCACCACAACAACCACGACGACGACAACAACAGAAAAAGCACAAGCGGTTGGTGATGATATAAAAGGGCTAAAACTAGTGCACCTATTGATGGCTGGCGCGGAAGCCTTAACCGGTTCAACAAAAAACCGCGACTTAGCTAAAGTGATATTGGTTCGGCTCAAGGAGTTGGTTTCAAACCATGCTCACGGCTCTAACATGGAAAGACTCGCCGCTTATTTCACCGAAGCCCTTCACGGTTTACTAGAAGGAGCTGGGGGTGCGCACAATAACCACCATCACCACAACAACAAACATTACCTCACAACCAGTGGGTCCCACGACAACCAAAACGACACACTCACTGCTTTCCAACTACTTCAAGACATGTCACCTTACGTCAAATTCGGCCACTTCACAGCCAATCAAGCCATAATCGAGGCCGTGGCCCACGAACGTCGCGTCCATGTCATCGATTACGACATCATGGAAGGGGTCCAATGGGCCTCATTAATCCAATCTCTAGCTTCCAACAACAACAGTCCACACCTCCGAATAACCGCATTATCACGAACAGGAGCAGGAAGGAGGTCAATCGCCACCGTACAAGAAACTGGTCGGCGATTAACCTCCTTCGCTGCTTCTCTCGGTCAGCCTTTTTCGTTTCACCACTGCAGGTTAGACTCAGACGAAACGTTCCGTCCTTCTACGTTAAAGCTTGTTCGTGGAGAAGCTTTGGTTTTCAACTGCATGTTAAATTTGCCTCATCTTAGTTACCGTTCACCTGATTCAGTTGCATCGTTTTTAAACGGAGCAAAAGCGTTGAATCCAAAGCTTGTAACATTGGTAGAAGAAGAGGTTGGATCTGTTGTTGGTGGGTTTGTGGAAAGGTTCATGGACTCGCTTCATCATTACTCAGCTGTGTTTGATTCATTAGAGGCTGGTTTTCCGATGCAGAATCGGGCCCGGGCTTTGGTGGAGCGGGTATTTTTCGGTCCGAGGATCGCGGGCTCATTGGGCCGGATTTATAGAACTGGTGGAGAGGAGGAGAGAAAATCATGGGGGGGGTGGTTAGGTGCGGCAGGGTTTAGGGGTGTTCCGGTGAGCTTTGCGAATCATTGTCAAGCGAAGCTTTTGTTGGGTCTTTTTAATGACGGGTATAGAGTTGAAGAGGTGGGTGTAGGTAGTAATAAGTTGGTTTTAGATTGGAAATCACGGCGCTTGCTTTCTGCTTCACTTTGGACTTGTTCTTCTTCAGATTCTGATTTATAG 1551 0.4836 MYMEMDMDMDAIHDLDFSGHSSLTNTPSSDDDYGCNWNQWSPIVNWDTFAGAQDGFHHLMDTIIDDRTTLLDQLSPTTTTTTTTTEEEEEEEETETTTTTTTTTTTTTTTTEKAQAVGDDIKGLKLVHLLMAGAEALTGSTKNRDLAKVILVRLKELVSNHAHGSNMERLAAYFTEALHGLLEGAGGAHNNHHHHNNKHYLTTSGSHDNQNDTLTAFQLLQDMSPYVKFGHFTANQAIIEAVAHERRVHVIDYDIMEGVQWASLIQSLASNNNSPHLRITALSRTGAGRRSIATVQETGRRLTSFAASLGQPFSFHHCRLDSDETFRPSTLKLVRGEALVFNCMLNLPHLSYRSPDSVASFLNGAKALNPKLVTLVEEEVGSVVGGFVERFMDSLHHYSAVFDSLEAGFPMQNRARALVERVFFGPRIAGSLGRIYRTGGEEERKSWGGWLGAAGFRGVPVSFANHCQAKLLLGLFNDGYRVEEVGVGSNKLVLDWKSRRLLSASLWTCSSSDSDL* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1063 516 PANTHER SCARECROW-LIKE PROTEIN 26 7 509 IPR030028 -
Tpr7g1063 516 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 7 509 IPR005202 -
Tpr7g1063 516 Pfam GRAS domain family 126 508 IPR005202 -
Tpr7g1063 516 ProSiteProfiles GRAS family profile. 117 508 IPR005202 -
Tpr7g1063 516 MobiDBLite consensus disorder prediction 73 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1063 Tpr-Chr7 10250972 10253086 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1063 91 511 GRAS Transcription Factor Family AT3G54220 35.185 1.01e-50 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Tpr7g1063 GRAS 8.2e-100 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1063 - - gmx:100782300 682.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g1063 7 10250972 10253086 Tpr7g1063 7 10250972 10253086 ECH