Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1051 ATGGTTAAGTCAGAGAATAACACCAAAATCAAAACAGAACCATTAACAAAAGCAAATATTATCTCAGATATTAGCAAGAAAAAGAAGTATAAAGGAGTAAGAATGAGAAGTTGGGGTTCTTGGGTTTCAGAAATTAGAGCACCAAATCAAAAAACAAGAATTTGGTTAGGATCTTATTCAACTCCAGAAGCAGCTGCTAGAGCTTATGATGCTGCACTTCTTTGCCTTAAAGGTTCTTCCTCTGCATCAAATCTCAATTTCCCTCTAAACTCTTCTTCACATTATTGCAATATTAAGAATCTTCAAGACATGTCACCAAAATCCATTCAAAGAGTTGCTGCTGCAGCTGCAAATAGTTTCATTGACAACAATAATGTTAATGTTAGTACTACGACCCCGTCATCGACATCTTCATCATTGGTTTCATCTCCATCATCAATGGCTTCTTCTGATGATGTTTCTTCACTTATAACATCTTATGATCAAGCTAATGATGGATCAATGGATATGATATCAGAAACTAATTGGTATGGATTAGAAGGTTTACAATCTCCTAAATATGTTGATCATATGTTGTTAAGTGCTTCTTTCTTTGATATTGATTCTTTATCACATTTGCTTAATGATGATGTGTATGAAGAAAGTGATATTAGTTTGTGGAACTTCAGCTGA 672 0.3393 MVKSENNTKIKTEPLTKANIISDISKKKKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTPEAAARAYDAALLCLKGSSSASNLNFPLNSSSHYCNIKNLQDMSPKSIQRVAAAAANSFIDNNNVNVSTTTPSSTSSSLVSSPSSMASSDDVSSLITSYDQANDGSMDMISETNWYGLEGLQSPKYVDHMLLSASFFDIDSLSHLLNDDVYEESDISLWNFS* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1051 223 Pfam AP2 domain 29 78 IPR001471 GO:0003700|GO:0006355
Tpr7g1051 223 ProSiteProfiles AP2/ERF domain profile. 29 88 IPR001471 GO:0003700|GO:0006355
Tpr7g1051 223 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF014 17 223 - -
Tpr7g1051 223 MobiDBLite consensus disorder prediction 127 150 - -
Tpr7g1051 223 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 17 223 - -
Tpr7g1051 223 SMART rav1_2 29 94 IPR001471 GO:0003700|GO:0006355
Tpr7g1051 223 SUPERFAMILY DNA-binding domain 29 88 IPR016177 GO:0003677
Tpr7g1051 223 CDD AP2 28 88 IPR001471 GO:0003700|GO:0006355
Tpr7g1051 223 PRINTS Ethylene responsive element binding protein signature 30 41 IPR001471 GO:0003700|GO:0006355
Tpr7g1051 223 PRINTS Ethylene responsive element binding protein signature 52 68 IPR001471 GO:0003700|GO:0006355
Tpr7g1051 223 Gene3D AP2/ERF domain 28 90 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1051 Tpr-Chr7 10148084 10148974 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1051 30 222 AP2-EREBP Transcription Factor Family AT1G21910 51.456 2.63e-46 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Tpr7g1051 AP2 2.9e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1051 - - cam:101495993 237.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g1051 7 10148084 10148974 Tpr7g1051 7 10148084 10148974 ECH