Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1038 ATGCTCGCTCCCGTCACGGATCTCAATCCCTCCGACAATCCCGCCACTCCGCCGGTCCGTAATGTCCGCCGGAGGTTGGTCCAATCAACGCTCTTCCCTCACAAGCCTCCACAACCCCGCAACAAACCAGAGGAAAACGGCGAAAGCAACGACGAACAAGACGAGGATTACTGCGATACGAAGAATCGCAGGAAGAGAAAATCTAAAGGAAAAATCACTTCTGTAAATAAAGGTTCCAAGAGTGCCACACCAAAGAAAAATTCTAATGGAAAGAGACAGAGTAATGGAAAAATCTCTATAGCTGATGCAATTATGGGGTCAACGTCGCGGAATGTTTTGTCTGATTTTGATAAGGCTGTTATACCTAAGCCTGATTTGCGGTTAGAGGCAAAATTGTCAGCTGAGGAAAATTCAAGGATGTATGCAGGACGGCAATTACATCCAATTTTTTCATCGTGTAAAGCGGGGAAGAAAGTTCAAGAGCTGTCTGAACCAGGAAGTAATGTATTCAAAGCTAAGGGTGAGGATGAGGATGAAAGTATTACCTTTGCTCCTATTCATGTTTTTGAAAATATCAAGGATGATACCTCATCCCTAGACTGGAGAAACTGGACATTTTTGGGAAATTCCACTTATGTGAACAGTGGTTCAGAAAGTTCAAATTCATCTATTTTGGGGGGTTCTGTCGAATGCTTAAATTTTGACAAACTTCTTAGTACTTTGGATCCAGTGGGAGCTTCAAGTTTTCAGAATTCCTCAAATTCCTTGGATATATTTTCTATGCATCCAGAAAATATGCAAGAAACATCACTGCCAAACTCAACTTTACTAGAGGAGCAAACAATAAGTGATCCGATGCCAAAAGATGCCAAAGTGGACATGGAGTTGGATGAATCTGGTACATTTTCTGTTGAAGCTGGCTATTTTAGAAAGTCACATACTGATGAGCCGTTGAGTAGATTTCTTCAAGAAAGTCTGAGGTCATACTATGTTGGTTGTGAGGATAAGGCAGAAGGCAGTTTATGGACATACAAATACAAGCCAACTAAGGCCGTTGAGGTATGTGGTAATGATGAAGCTGTGAAGTTCTTGAGTGACTGGCTACATCAGTGGCATGAAAGACGTTACAAACCCAGGAAGGATACGTCTAATAGGGATACAAGGGTCATTCAAGATGACGATTATGATTTTATCTGTTCTGACAGTGACTATGATTCAGAAGATATGAATGAGGAGGATTCCCTGCAGAATGTTCTTTTAGTTACAGGACCAATAGGGAGTGGCAAGTCTGCAGCAGTCTATGCTTGTGCCCAAGAGCTAGGCTTTGACATATTGGAGCTCAATGCATCAGATTGTAGAAATGGGACTATTGTCAAGCAATATTTTGGAGATACTCTTGGTTCACATGGGTTCAAAAGGTTATCAGAACACACTGCGAGTTCACAGAAGATTACTACAAAGTTCCCCCAAGCTCCTGCTTTGGTTAATGGTAAAGCTGCAGATGAGGTGAATGATGGAGTAGTTGAACTAATAACCATATCTGATGATGAAGCTTGTAACCCTGGTGAAACATCACAAAAGTTACATGGCAAGAATACTGTTGCTTGTGATAAAGTCCAGACTTTGATTCTAGTTGAGGATGTGGACATACTTTTTCCTGGAGATCGTGGATGTATTGCTGCCATACAACAGATTGCCGAGACAGCAAGGGGTCCAATTATATTGACCAGCAATAGTGAGAATCCTGGCCTTCCAGACAATTTTGATAGGCTTCATGTTTCGTTCTCATTGCCAACACCAAAGGAGTTGATTTCCCATCTGTACTCTGTTTGTCTCAGAGAAGGAGCCGACATCCATCCACTTCTACTGGAGAAGTTTATACAGTCCTGTGATGGAGACATCAGGAAAACCATTATGCATCTTCAGTTCTGGTTGCAGAGTAAAATATATAGAAAAGATCTAAAAGCACATACAGGCTATGTCTCACTTCCATTTGATCTTGAGGTTGGTCATCAGATACTACCCAAGATAATGCCGTGGGATTTCCCCTCAGAGATATCCGAACTAATTGAGAACGAATTTGTCAAATCAGTAAATAAAACGGATGAGAATTCCAGTTTGCAAGGGTTAGTTGATGAAGAGCTTCTTCACATAAATGAAAGTCAAAATGATTTAGATGAGCAGTATATGGAGACTCATTATATAAAAGCCAAGAAGGTGGAGATGATTCAGAGAAATGGGTCTATAACAGATTACAGTGAGCTTGAAATTCAATGCAAAGCTATTTCAGAGTTTTCCAATTCTTCTGGATCCCCTGTAGCATCCTATCTGCAAAATGGTCGAAGGAAACTTGTAGTAGTGTCCTCTGATTCTGAAGAGGAGGATTCAAATAATCGATATCCTCAAGACACAGACGATGAAGCTAACAACAGACATTCCATCAAAGGAAATAATGAATGTACCTCTGAGTTTCAGTTGAATGATAGTTTCCCCAGCACATCTGTTCGTAAACTGGTTTGTTCTGAATTGGAGGATTCAGATGATGTACATGTTAAATATTCAGAATCAGCTGATGTTAATTGCATAAATGAGACATCTAAATCATTTGATATATCCTGTGTACCAGAATCAACGTTTGTTGTTGAGACTGCAATTGAAAATGGAACCGATACAATGTCTGGAGTGGTGTCTTCTGGCCACTGTCTGGAAGTTTCTATGAATAATGAGTTTAAACCGTTCACTTCAAGTGTTCGCAGGCGCTTAGCAAAATTGTCAGAAAATTCAGATATATTGATGGATACTGAAGTCCCAGATTCTTCTCCAAAAGAAGCTCTGCAAGATTTTGTAGATGAATATATGGAAACTACAATTACCAAGGTGATGGATGAGTGCAGTCGTGTGGATTTCAAACTAAAGTCAACATTTGTTGAGTCCAGTCCATCATTGGAAACAGATGTGGTACAGAATTTGTGGGAAAAACTCCGACAAATGGATTTAAAACAGCATGCTATCTCAGAACAGTTAGGTGTTTCTCAAGTTGTTAAACTTGCTAGTGGCTTGAGCAATCTAATTTCAGAAGTGGATTTGTTTCATAATTACCAACATAAACATGATATTTTAGAGCCCCGAAGCTTCGTTTCTAATGAAACTACAAGTAGTTGGTACAATGACGAAACAATGATGTCCAGTGTTGCTGTGCATGGGTTTTGTTTTTATGTTAAACTTATAGCAGATGTTGGATCAAAGCTAGGTTGTGCGAATAGGATTGATTTAACTTCAGAGGTGTTGGCTTCCACAACTAATACTATGGCGTTGGGGAAATTATCCAGACTGGATATTGCCAAAAGCACAGCTATTTATACTGGGAAGGAATTAGAGTTGAACAATCCAATAAATAATATGAAGAGTGAAAATAAAGCATCTCTGTTTGAGGTTGTCGAATCCATTGTTCCTGCAAGAATATCCTTAGCATTGAAAGGTGATATCTTCAATGAATATCTCTCTTCATTGCGCCAAATTTCAAGGTCAGACGCAGTCCGTGTTTCGCAAGGTGTCGAAAAGAAGAGAAGAGGAAGGTCGCGGGGTGCTCAACATTATTTGAGCAGATGCACAACACTGTCTCCCGAAGATATAGCGTTGGTCAGTGATGATTTGTACAGGAATGTTTCCTCACAACATACAACTAATGTGGAAAGTAAACTACTATAG 3708 0.3999 MLAPVTDLNPSDNPATPPVRNVRRRLVQSTLFPHKPPQPRNKPEENGESNDEQDEDYCDTKNRRKRKSKGKITSVNKGSKSATPKKNSNGKRQSNGKISIADAIMGSTSRNVLSDFDKAVIPKPDLRLEAKLSAEENSRMYAGRQLHPIFSSCKAGKKVQELSEPGSNVFKAKGEDEDESITFAPIHVFENIKDDTSSLDWRNWTFLGNSTYVNSGSESSNSSILGGSVECLNFDKLLSTLDPVGASSFQNSSNSLDIFSMHPENMQETSLPNSTLLEEQTISDPMPKDAKVDMELDESGTFSVEAGYFRKSHTDEPLSRFLQESLRSYYVGCEDKAEGSLWTYKYKPTKAVEVCGNDEAVKFLSDWLHQWHERRYKPRKDTSNRDTRVIQDDDYDFICSDSDYDSEDMNEEDSLQNVLLVTGPIGSGKSAAVYACAQELGFDILELNASDCRNGTIVKQYFGDTLGSHGFKRLSEHTASSQKITTKFPQAPALVNGKAADEVNDGVVELITISDDEACNPGETSQKLHGKNTVACDKVQTLILVEDVDILFPGDRGCIAAIQQIAETARGPIILTSNSENPGLPDNFDRLHVSFSLPTPKELISHLYSVCLREGADIHPLLLEKFIQSCDGDIRKTIMHLQFWLQSKIYRKDLKAHTGYVSLPFDLEVGHQILPKIMPWDFPSEISELIENEFVKSVNKTDENSSLQGLVDEELLHINESQNDLDEQYMETHYIKAKKVEMIQRNGSITDYSELEIQCKAISEFSNSSGSPVASYLQNGRRKLVVVSSDSEEEDSNNRYPQDTDDEANNRHSIKGNNECTSEFQLNDSFPSTSVRKLVCSELEDSDDVHVKYSESADVNCINETSKSFDISCVPESTFVVETAIENGTDTMSGVVSSGHCLEVSMNNEFKPFTSSVRRRLAKLSENSDILMDTEVPDSSPKEALQDFVDEYMETTITKVMDECSRVDFKLKSTFVESSPSLETDVVQNLWEKLRQMDLKQHAISEQLGVSQVVKLASGLSNLISEVDLFHNYQHKHDILEPRSFVSNETTSSWYNDETMMSSVAVHGFCFYVKLIADVGSKLGCANRIDLTSEVLASTTNTMALGKLSRLDIAKSTAIYTGKELELNNPINNMKSENKASLFEVVESIVPARISLALKGDIFNEYLSSLRQISRSDAVRVSQGVEKKRRGRSRGAQHYLSRCTTLSPEDIALVSDDLYRNVSSQHTTNVESKLL* 1236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1038 1235 MobiDBLite consensus disorder prediction 787 811 - -
Tpr7g1038 1235 CDD AAA 411 477 - -
Tpr7g1038 1235 Gene3D - 339 593 IPR027417 -
Tpr7g1038 1235 Gene3D - 598 660 - -
Tpr7g1038 1235 PANTHER CHECKPOINT PROTEIN RAD17/RAD24-RELATED 118 1230 - -
Tpr7g1038 1235 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 341 650 IPR027417 -
Tpr7g1038 1235 MobiDBLite consensus disorder prediction 74 98 - -
Tpr7g1038 1235 Pfam ATPase family associated with various cellular activities (AAA) 419 461 IPR003959 GO:0005524|GO:0016887
Tpr7g1038 1235 MobiDBLite consensus disorder prediction 1 98 - -
Tpr7g1038 1235 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 118 1230 IPR004582 GO:0006281
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1038 Tpr-Chr7 9933611 9943223 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1038 342 643 Core DNA Replication Machinery Family AT5G22010 24.204 8.46e-13 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1038 - - gmx:100784209 1514.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g1038 7 9933611 9943223 Tpr7g1038 7 9933611 9943223 ECH