Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1024 ATGGCTTACCTCGGCGATACAAATGTTGGAGATGCCAATAAAGTCGGTATTATCATTACTCGGTCGGATAAAAAGAACAGAATAAGAGGAAGAAATGACAAGTTGATTTTGGGTTGTGACAAAGGTGGAAAGTATGACTCTTCAGAAAGTTCCACGACAACTGCATCGAAAAAGTGTAACTGTCCATTTAAAATTAGAGCTGCACCTTCAACAGATGGTTCAGGATGGAAAGTTCAGGTTATTCATGGAGTTCACAACCACGGGCTACCTGACCAATATCATGGTCATCCTCGCAAGGCACGTTTAACCGCTGATGAAAACAAACGTGTTCAAGATTTGACAAAGCGTAAAGTAGCACCAAGGCACATTGTTTTAGATTTGAAAGATCAAAATCCAGAGTCTGTTGTTGATGCCACACTTATATATAGGAAAAGACACATGATGCAAATACAGGAAAGAGGCTCCAAAACAGAGCTGCAACACTTGCTGCAGTGGTTAGATGATACAAAATATGTCAGCTGTAATAGAAGAAAAGATGATGACTCCGATGTTTTGAGTGATATTTTTTGGGCGCATCCAGATTCAATCAAGTTGTTGAACTTGTTTCCCATTGTTTTGGTTATGGATTGCACATACAAAACTAATAAATATAGACAGCCACTGCTTGAAATTACTGGCATAACGTCAACTAACATATGA 699 0.3891 MAYLGDTNVGDANKVGIIITRSDKKNRIRGRNDKLILGCDKGGKYDSSESSTTTASKKCNCPFKIRAAPSTDGSGWKVQVIHGVHNHGLPDQYHGHPRKARLTADENKRVQDLTKRKVAPRHIVLDLKDQNPESVVDATLIYRKRHMMQIQERGSKTELQHLLQWLDDTKYVSCNRRKDDDSDVLSDIFWAHPDSIKLLNLFPIVLVMDCTYKTNKYRQPLLEITGITSTNI* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1024 232 Pfam Transcription factor AFT 45 89 IPR014842 GO:0000981|GO:0036086
Tpr7g1024 232 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 20 230 - -
Tpr7g1024 232 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 20 230 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1024 Tpr-Chr7 9727420 9728202 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr7g1024 AFT 2.3e-06 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1024 - - cam:101511670 215.312