Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1013 ATGCAAATTGGAATATTAAATTCTACAATATTATGCCATAGTCCTTATGGTATTACTCACAAGAGTGTGTGGGAGTTAGGCAACCCTCTTACTTCCCCAACTCCTCTTCTCCTTCTGCAGATCTCTATGATTACCGTAGTCATACAGTTTTTCGATGCTTGTCTCAGACCATTAGGACAAACCTCCCTTGTATCTCAGATTCTTGGAGGATTGGTATTTGGTCCATCAGTTTTGGGACACAAAAAGATGCTGACAAGTATTTTATTCCCTATGAAAGGTTCTGTAATACTTAAAACAATGGCAACTTTCTGTCTCAATTTCTTCTACTTCATATGTTGTGTAAAGATGGATACAGTCACAATGCTGAAAACAGAAAAACAGGCCATCACAATCGGTATTTCTGTTTTCGCGTTAACATTAGGAGTCCCTCTTGGATTAGCCTTTGCATTGATGAAATATGTAGCCATGGACAAAACCCTCTCGGACGCTCTCCCAGTAATAGCTGTTTCGCAAAGCTTAACCGTATTCATCAGCATATCAGTCCTTCTAGCAGAGCTTAAAATCCTTAACACGGATGTTGGACGTCTAACCTTATCGTCAGCAATGTTTGCTGATGTTGTTAGCTTCTCTATGTCGGTACTTATGTTTGCAGCATTGCAGACTAAAGCTGGTAATAGTAGTATGATAACAATAGTGTGGATCATTTTATCCATAATTGCACTCTTTATTGTTATCGTATATGTAATGCGGCCAGCTATACTATGGTCTGTAGCACGACTACATGGAAAGCCTATCGATGAAGTTTGCATCCTTTGTGTAATTGTATGTGTTCTCCTCACTGCATTTATTAGTGAATTCATTGGACAGCATTTTGCTATGGGACCAATTATTTTAGGCTTGGTTGTTCCTGAAGGGCCGCCTTTAGGAACAAGTTTGATAGCAAAAATGGAGACTGTTACTTGTGGTTTTTTGTATCCAATCTACCTTGCTGTCAGTGGATTGCAGACTGATGTCTTCAAAATCAACATTCAGTCTACTTGGATTGTTACTGTCATAGTTATTGCCGGTTTCGTGGTGAAGATCGGTGGTGTTATGTTGCCGGGTTATTATTACAATGTCCCTATGAAAGAATGTTTTATGATTGGGCTCCTTCTTAATGGAAGAGGTATAGCTGAGCTCACCATGTACAATATATGGAAGGAAGGCAAGATACTAACAGAACAAGAATTTGCTTTGATGGTGGTGTCTCTTCTAGTGATAAATGCTATCATAGCACCACTGATAAACTTCCTATTTGATCATTCAGCCCCATATAATTCAGGAAAGAGATGTTCAATACAACATACAAAGCGAGACTCTGAGCTCCGAATCATGGCATGCATTTACAAAGATGAAAACATCCCTACAATGCTCAATGTCATAGAAGCGTCATGTGCAAGCAAAGAAAGCAATGTTGCAGTTATAGCACTTGTCCTTGTAGAGCTTCTGGGAAGATCAAGGCCTATTCTCGTTGCTCACCAACCGCACGAAACGCTTCGGTCAACCAAATGCCATTCACCTCGGCTCGAAAATGCATTGAAACAATATGAACAGCTAAATGAAGGGTGTGCATATATTCAATCATTCACCTCAATCTCCGACTTCGACACAATCCACGGTGACGTTTGTCAAATATCGCTCGACAGAAGAGCCAACATTATAATAATGCCATTTCACAAAAGATGGGAGATAGATGGCTCGGTTGAGGTAAACAATAGAGCAGTCCAAGCAATAAACGTTAAAGTTCTCGAAAGAGCGCCTTGTTCGGTCGGAATCCTCATCGACCGAGGCATCTTAAGCGGTTCTCCATCGCTTTTAATATCTAATAAATCAACATACTATGTAGCTGTGCTGTTCATAGGAGGTCCAGATGATGCTGAAGCACTAGCCTACGCTAGTAGAATGGCTAGACATGAATGTGTAAGTGTATCAGTAGTCCGATTCCTTGTTTTCGGAGAAGAGAATTCAAAAGATAGAAAACGTGACAGCGATCTTGTAGACGAATATAGATACTATAATGTTGGAAATATAAGGTTTGAGATAACAGAAGAAGTTGTGAAAGATGGAATAGAATTTTCTTCTAGTATAAGAAGAATGATAGATTATTTTGATTTAGTTATTGTTGGGAAGGGACATCCACAATCAGTTTTGTTACGCGGACACGATCAATGGAGTGAGTGTCCCGAGTTAGGCGTGATCGGTGATATGTTGGCTTCACAGGATTTTATGACAAAGGCATCTGTGTTGGTTGTTCAACAACAAAGAATGGGAGGGAGATTGGTTAACCCTAATATTAATACATTGCCAAATCAAAGAGGTTCTCCTGATGTTTCAATAATGGATGAACCACCAAGAGCTTCTTGTAGTATTTCTGTGGATAAATATGACAAAATGTAG 2436 0.3957 MQIGILNSTILCHSPYGITHKSVWELGNPLTSPTPLLLLQISMITVVIQFFDACLRPLGQTSLVSQILGGLVFGPSVLGHKKMLTSILFPMKGSVILKTMATFCLNFFYFICCVKMDTVTMLKTEKQAITIGISVFALTLGVPLGLAFALMKYVAMDKTLSDALPVIAVSQSLTVFISISVLLAELKILNTDVGRLTLSSAMFADVVSFSMSVLMFAALQTKAGNSSMITIVWIILSIIALFIVIVYVMRPAILWSVARLHGKPIDEVCILCVIVCVLLTAFISEFIGQHFAMGPIILGLVVPEGPPLGTSLIAKMETVTCGFLYPIYLAVSGLQTDVFKINIQSTWIVTVIVIAGFVVKIGGVMLPGYYYNVPMKECFMIGLLLNGRGIAELTMYNIWKEGKILTEQEFALMVVSLLVINAIIAPLINFLFDHSAPYNSGKRCSIQHTKRDSELRIMACIYKDENIPTMLNVIEASCASKESNVAVIALVLVELLGRSRPILVAHQPHETLRSTKCHSPRLENALKQYEQLNEGCAYIQSFTSISDFDTIHGDVCQISLDRRANIIIMPFHKRWEIDGSVEVNNRAVQAINVKVLERAPCSVGILIDRGILSGSPSLLISNKSTYYVAVLFIGGPDDAEALAYASRMARHECVSVSVVRFLVFGEENSKDRKRDSDLVDEYRYYNVGNIRFEITEEVVKDGIEFSSSIRRMIDYFDLVIVGKGHPQSVLLRGHDQWSECPELGVIGDMLASQDFMTKASVLVVQQQRMGGRLVNPNINTLPNQRGSPDVSIMDEPPRASCSISVDKYDKM* 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1013 811 Pfam Sodium/hydrogen exchanger family 46 426 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Tpr7g1013 811 PANTHER CATION/H + ANTIPORTER 7 779 - -
Tpr7g1013 811 PANTHER CATION/H(+) ANTIPORTER 15-LIKE 7 779 - -
Tpr7g1013 811 PRINTS Rhesus blood group protein signature 33 51 IPR002229 GO:0005887
Tpr7g1013 811 PRINTS Rhesus blood group protein signature 131 148 IPR002229 GO:0005887
Tpr7g1013 811 PRINTS Rhesus blood group protein signature 167 183 IPR002229 GO:0005887
Tpr7g1013 811 PRINTS Rhesus blood group protein signature 349 367 IPR002229 GO:0005887
Tpr7g1013 811 Gene3D - 36 437 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1013 Tpr-Chr7 9562396 9567858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1013 7 766 Antiporter Super Family AT2G13620 36.915 1.01e-166 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1013 - - gmx:100779700 1016.14