Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1008 ATGGCTATTTCTCACTCTTTCATTCCTTTGACCTTTTTCATATTGCTCTTCAAGGTCATAGCCGGCATTGATACAAATTGGTATGATGCTCACGCAACCTTCTATGGTGGTCCGTCAGGAGCTGGAACCATGCAGGGGGCTTGTGGTTATGGTGATCTCTACAAACAAGGATATGGACTTGCAAACACAGCACTAAGCACAGCTCTATTCAATAACGGAGCTACTTGTGGTGCTTGTTTTCAGTTAGTTTGTGTGAACGATCCTCAATGGTGCATAAAGGGTGCAAGGCCAATCACGGTAACCGCAACAAATTTTTGTCCTCCAGATTACTCCAAAACCACTGATATTTGGTGTAATCCACCACAAAAACACTTTGACTTGAGTTATAAAATGTTCACTTCTATTGCCTACGAAAAAGGCGGTATCATACCAGTTAAATATCGACGTGTTTCATGTTTCAAAAGAGGGGGTGTAAGGTTTGAGATCAACGGAAACCCTAATTTCTTGTTAGTTTTGGTGTTCAATGTTGCTAATGCTGGCGAAGTTTCTCGTGTTAGTGTCAAAGGATCTAAGACTGGCTGGATTCCCATGAAACGCAATTGGGGACAAAAGTGGGATTCTGGAGTTAATTTGGTAGGACAAGCTTTGTCATTTCAAGTTACTACAAGTGATGGAAAAACTTTGGAGTTTTATTCAGTTTCTCCTTACAACTGGCAATTTGGACAGACTTATGAGGGTCGGGGTAATTTTTAG 753 0.4117 MAISHSFIPLTFFILLFKVIAGIDTNWYDAHATFYGGPSGAGTMQGACGYGDLYKQGYGLANTALSTALFNNGATCGACFQLVCVNDPQWCIKGARPITVTATNFCPPDYSKTTDIWCNPPQKHFDLSYKMFTSIAYEKGGIIPVKYRRVSCFKRGGVRFEINGNPNFLLVLVFNVANAGEVSRVSVKGSKTGWIPMKRNWGQKWDSGVNLVGQALSFQVTTSDGKTLEFYSVSPYNWQFGQTYEGRGNF* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1008 250 Pfam Expansin C-terminal domain 158 235 IPR007117 -
Tpr7g1008 250 SUPERFAMILY Barwin-like endoglucanases 26 175 IPR036908 -
Tpr7g1008 250 PANTHER EXPANSIN-A15 14 250 IPR002963 GO:0009664
Tpr7g1008 250 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 167 246 IPR007117 -
Tpr7g1008 250 Gene3D - 157 250 IPR036749 -
Tpr7g1008 250 PRINTS Expansin/Lol pI family signature 26 41 IPR007118 GO:0005576
Tpr7g1008 250 PRINTS Expansin/Lol pI family signature 44 62 IPR007118 GO:0005576
Tpr7g1008 250 PRINTS Expansin/Lol pI family signature 66 84 IPR007118 GO:0005576
Tpr7g1008 250 PRINTS Expansin/Lol pI family signature 140 156 IPR007118 GO:0005576
Tpr7g1008 250 PRINTS Expansin/Lol pI family signature 194 208 IPR007118 GO:0005576
Tpr7g1008 250 PRINTS Expansin/Lol pI family signature 232 246 IPR007118 GO:0005576
Tpr7g1008 250 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 45 157 IPR007112 -
Tpr7g1008 250 Pfam Lytic transglycolase 63 147 IPR009009 -
Tpr7g1008 250 SUPERFAMILY PHL pollen allergen 154 246 IPR036749 -
Tpr7g1008 250 Gene3D - 18 152 IPR036908 -
Tpr7g1008 250 PRINTS Expansin signature 57 71 IPR002963 GO:0009664
Tpr7g1008 250 PRINTS Expansin signature 84 95 IPR002963 GO:0009664
Tpr7g1008 250 PRINTS Expansin signature 98 108 IPR002963 GO:0009664
Tpr7g1008 250 PRINTS Expansin signature 115 132 IPR002963 GO:0009664
Tpr7g1008 250 PRINTS Expansin signature 132 145 IPR002963 GO:0009664
Tpr7g1008 250 PRINTS Expansin signature 156 168 IPR002963 GO:0009664
Tpr7g1008 250 PRINTS Expansin signature 168 189 IPR002963 GO:0009664
Tpr7g1008 250 PRINTS Expansin signature 203 224 IPR002963 GO:0009664
Tpr7g1008 250 PRINTS Expansin signature 232 248 IPR002963 GO:0009664
Tpr7g1008 250 PANTHER EXPANSIN-A21-RELATED 14 250 - -
Tpr7g1008 250 SMART dpbb_1 62 147 IPR007112 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1008 Tpr-Chr7 9512190 9513247 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1008 22 250 Expansin Gene Family AT5G39280 64.192 3.03e-113 324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1008 - - zju:107415875 367.081