Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0994 ATGGTGCCTAGAAAAAGGAATTTGAATCAACAGAAGCATCATTTCAATGATGATTATCCATTTGAAGCAGTATCGAATGGCTCATGGCAACCGGTAGAAGTCATAAAAATTGAGTCCGGAAAAACATCCATACAATTCATGGATACCGAACAATTTCAGAGCCCTATATCATCAAACATCCGAATCAAATCAAGAAAAGCAACTGCATATGATTGCTCGCGCTTTTTAAGACGTGGTATCGACATAACAATGCTATTGGGGTATTGTCACCATGATAATCCAAATCAATTTGGTCCTATTCCAATGTGGATGGATGCAAGAATAACTTCTATTCAAAGACAACCTCACGAACGTGACCAATGTTCGTGTAAATTTTATGTTAACTTGTATGATGATCAAGGTTCACTTGGTTCAGAGTTAAAGACTCTTGATAGAGAGGTTAATGTCATTGGAATAGATCAGATTTTCATCCTTCAAAGGCTGCAGCATAATATCTGTGAAAGCTTGTTAAAAAAGAATGACAGTTCTGAAAAAATTAAGCCTTATAGATGGGACTCATCACTAGATTGTACTTCCCTATCCCAATCTAGGTTACTCTTAGGGAAATTTTCATCTGATCTTTCATGGTTAGTCACAACATCTTTTTTAAAGAAGGTTTTGTTTCGGATAAGGTCCGCACAAAACAAGATAGTGTATCAAGTTGATACTGAAATTGTTAGTCCTTTTGTAATAGATGTTGTGAACTTCAAATCAAAAGACGGATCATTAGTACCGCTTGTTTTTGAATTTGATCTGTTTCATGATTATGATGGTAACCAAGATGAAACGTCATCAGTTTTGTCTAATGAACTGGAAGATTTACGACGTTCAAAACGTCGGATTGTACAACCCAAACGTTATGTAGATTCTGATGTTGAGAAGTTGGAAGTTGGTAGTTCTAGAACTCGGCCGTACAAAAGATCAAGATATGTGATCGAGGATGACATCTATTCTTCATATTCAGAAGACGAAGTTGGTGATAAAGTTTCGTTGGGGGAGTATTATAGTTTTGGCAAAGAGATGCTTAGGAGGAGGCGATTCCATGATTCAGATGGTATGGATTTGGAAGGAAAATGGGAAGGGATAAATTTCCAAAAAAGAGCTCCAACAACAAGACACCGTTCCATTTTTACGAGCACAAATCTTGTTCGTGAAGAACAAGATCATAAAGTCGGTAGGTCTTTAAATTCTGATGCCTGCATGGAAATGGTAGATACCTACATGAAGGACTTGGATGGTCTACCAACTGTTGATGAAGAAACAACCGAGTTGGAGCATAAGGCGGAAGAAAATGTATCCAAAAGCAATGATGAGGAGGAAGAAAATCTTGATGATTTGTGGGCTGAATTGGATACGGCTTTGATATCAAGTAATCTTCTTGATGGAACTGAGGGTTCAAATGCTGAGGTTTTAGCCGAGTCTGAGAAAGAATCCACAGAAATTTGTGAACATGATTATATAATGGATGAACAAATTGGAATATACTGCCATCGATGCGGCTTTGTGAAAACTGAGATACGACACATTTCTGAACATGTTGTAACTCCAATTGAAAGTCCAAGACGGTACAGAGAGGAGAAACAATGCATTGAAGAAGATAAGGAAAATCATAAATCAGTGGAAAAAGTTGATGAAGATGTTCATGATGGTTTGTTCTCAACTGATGCTACTGATCCTGATGAACCAATATCTAAAGAAAATGACAGTGTTTGGGAATTGATTCCAGAACTCAAAGAAAAAATGCACGAACACCAGAAAAAGGCTTTTGAATTTCTTTGGCAAAACATTGCTGGCTCTTTGGAACCATCACTCATGAAAGAAAAATCGAAAACAAATGGTGGTTGTGTTATATCACATGCTCCTGGAGCTGGAAAAACCTTTCTCATCATTTCTTTTCTTGCAAGTTACTTGAAGTTATATCCAGGGAAGAGACCATTAGTCCTTGCTCCAAAAACCGCGTTGTACACGTGGTGCAAAGAGTTCAAAAAATGGAATGTTTCTGTACCGGTGTATCTTATCCACGGTCGTCGAACTAGGAAAGCTTCGACCACATCAAAATCAGTGGCTCTTCCTGGAGTTCCAAGACCTTCTAGTGAAGTGCAACATGTTTTAGATTGTCTTAGCAAGATCAAAAAATGGAATTCACACCCTAGTGTTCTTGTCATGGGTTATACTTCATTTTTAGCATTAATGAGATCAGAAGATTCAAAATTTGCACACAGAAAATATATGGTTAAGGCATTGAAAGAAAGCCCTGGAATCTTGATACTTGATGAAGGACACAATCCTAGAAGCACTAAATCAAGATTGAGAAAATGTTTGATGAAACTTCCAACAGAATTGAGAATACTACTTTCTGGCACGTTGTTTCAGAACAATTTCGGTGAATATTTCAACACACTTTGTTTAGCTAGACCGAAATTTGTCCACGAAGTTCTACAAGAGTTGGATTCTAAATACCGAAGGAGAGGCAAAGTAGTGAAGAAAGAGCCGCATTTGCTTGTGGCGCGGGCGAGGAAATTCTTCTTGGACAACATTGCAAAGAAAATTAACTCAGACATTGATGAGGAGAAGATGCATGGTCTACATGTGCTGAGAAAAATTACTTCTGGTTTTATTGATGTTTACGACGGTGGAAATTCTTCTGATACTCTTCCTGGTTTACAAATCTATTCATTGCTCATTAATACGTTCGATGAACAACATGAGATTGTACAGAAACTTGAGAAGAAAATGGCTGAATGCACTGGTTACCCTCTTGAGGTTGAGCTTTTGATAACGCTCGCATCGATACATCCCTGGTTGATCAAAACAGCAGCAGCATGTGCAGCTAAGTTTTTCACCGAGGAAGAATTGGAGAGACTAGAATCATTGAAGTTTGATTTGAGAAAAGGTTCCAAAGTGAGATTTGTTCTGAGCCTAGTTTACCGCGTAGTGAAAAAGGAAAAGGTTCTTATCTTTTGTCACAACCTTGCACCAGTGAGGTTTTTTATAGAGTTATTTGAAAAGTATTTTCAGTGGCAAAATGGTAAAGAGATTCTGTTACTAACTGGTGAACTAGATTTATTTGAAAGAGGTAAAGTGATAGATAAATTTGAAGATCCACGCGGCAGTTCGAAGATACTTCTTGCTTCAATCAATGCTTGTGCCGAAGGGATTAGTTTAACAGCAGCTTCTAGAGTGATTTTTTTGGATTCTGAGTGGAATCCTTCAAAAACAAAGCAAGCTATTGCGCGCGCTTTTCGTCCAGGTCAGCAGAAAATGGTTTATGTGTATCAGTTATTGACGACGGGGTCGATGGAGGAAGATAAGCATAGAAGAACTAGTTGGAAAGAGTGGGTTTCTTGCATGATTTTCAGTGAGGAATTTGTGGAAGATCCTTCTAAATGGCAAGCTCAGAAGATTGAAGATGATATACTTAGGGAGATGGTTGAAGAGGATAAATCTAAAGCTATTCATATGATTTTGAAGAATGAAAAGGCTTCAACAAGCTAA 3534 0.3783 MVPRKRNLNQQKHHFNDDYPFEAVSNGSWQPVEVIKIESGKTSIQFMDTEQFQSPISSNIRIKSRKATAYDCSRFLRRGIDITMLLGYCHHDNPNQFGPIPMWMDARITSIQRQPHERDQCSCKFYVNLYDDQGSLGSELKTLDREVNVIGIDQIFILQRLQHNICESLLKKNDSSEKIKPYRWDSSLDCTSLSQSRLLLGKFSSDLSWLVTTSFLKKVLFRIRSAQNKIVYQVDTEIVSPFVIDVVNFKSKDGSLVPLVFEFDLFHDYDGNQDETSSVLSNELEDLRRSKRRIVQPKRYVDSDVEKLEVGSSRTRPYKRSRYVIEDDIYSSYSEDEVGDKVSLGEYYSFGKEMLRRRRFHDSDGMDLEGKWEGINFQKRAPTTRHRSIFTSTNLVREEQDHKVGRSLNSDACMEMVDTYMKDLDGLPTVDEETTELEHKAEENVSKSNDEEEENLDDLWAELDTALISSNLLDGTEGSNAEVLAESEKESTEICEHDYIMDEQIGIYCHRCGFVKTEIRHISEHVVTPIESPRRYREEKQCIEEDKENHKSVEKVDEDVHDGLFSTDATDPDEPISKENDSVWELIPELKEKMHEHQKKAFEFLWQNIAGSLEPSLMKEKSKTNGGCVISHAPGAGKTFLIISFLASYLKLYPGKRPLVLAPKTALYTWCKEFKKWNVSVPVYLIHGRRTRKASTTSKSVALPGVPRPSSEVQHVLDCLSKIKKWNSHPSVLVMGYTSFLALMRSEDSKFAHRKYMVKALKESPGILILDEGHNPRSTKSRLRKCLMKLPTELRILLSGTLFQNNFGEYFNTLCLARPKFVHEVLQELDSKYRRRGKVVKKEPHLLVARARKFFLDNIAKKINSDIDEEKMHGLHVLRKITSGFIDVYDGGNSSDTLPGLQIYSLLINTFDEQHEIVQKLEKKMAECTGYPLEVELLITLASIHPWLIKTAAACAAKFFTEEELERLESLKFDLRKGSKVRFVLSLVYRVVKKEKVLIFCHNLAPVRFFIELFEKYFQWQNGKEILLLTGELDLFERGKVIDKFEDPRGSSKILLASINACAEGISLTAASRVIFLDSEWNPSKTKQAIARAFRPGQQKMVYVYQLLTTGSMEEDKHRRTSWKEWVSCMIFSEEFVEDPSKWQAQKIEDDILREMVEEDKSKAIHMILKNEKASTS* 1178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0994 1177 Gene3D - 902 1176 IPR027417 -
Tpr7g0994 1177 CDD SF2_C_SNF 979 1108 - -
Tpr7g0994 1177 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 619 820 IPR014001 -
Tpr7g0994 1177 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED 21 329 IPR044567 GO:0080188
Tpr7g0994 1177 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED 336 1176 IPR044567 GO:0080188
Tpr7g0994 1177 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2 21 329 - -
Tpr7g0994 1177 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2 336 1176 - -
Tpr7g0994 1177 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 580 831 IPR027417 -
Tpr7g0994 1177 SMART ultradead3 590 828 IPR014001 -
Tpr7g0994 1177 SMART helicmild6 1012 1097 IPR001650 -
Tpr7g0994 1177 Pfam Helicase conserved C-terminal domain 980 1096 IPR001650 -
Tpr7g0994 1177 Pfam SNF2-related domain 603 870 IPR000330 GO:0005524|GO:0140658
Tpr7g0994 1177 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 897 1161 IPR027417 -
Tpr7g0994 1177 Gene3D - 567 855 IPR038718 -
Tpr7g0994 1177 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 984 1149 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0994 Tpr-Chr7 9297920 9303314 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0994 1023 1115 RAD5 or RAD16-like Gene Family AT5G05130 40.426 4.24e-12 68.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Tpr7g0994 SNF2_N 1.4e-16 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0994 K10875 - zju:107413919 1123.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0994 7 9297920 9303314 Tpr7g0994 7 9297920 9303314 ECH
Tpr7g0994 7 9297920 9303314 Tpr4g2344 4 24821845 24833867 PCT