Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0986 ATGGGTGGTAATACTAATTCCCCTTGTGCTTCATGCAAACTCCTTAGACGCCGTTGTGCTAAGGATTGCATTTTTTCTCCTTATTTCCCTTCAAATGATCCTCAAAAGTTTGCAATTGTTCACAAAGTTTTTGGTGCCAGCAACGTTAGCAAAATGCTCCAGGAACTTCCTATTCAACAGAGATCAGATGCAGTAAGCAGTTTAGTGTATGAAGCACATGCAAGAGTGAAGGATCCTGTTTATGGTTGTGTTGGAGCCATATCTTACCTTCAAAACCAAGTTTCGGATCTTCAAATGCAGCTTGCAGTAGCTCAAGCAGAGATACTATGTCTCCAGATGCAACATGAGCCTGTAATGCAAAATCCCGATATTGCCCTTGATCACAAATCTTCTTACCTTCTCCAAAATGATCTTCCTCAGTACCTCAACTTTCCATCTTCAAGCAATAGGAATTGA 456 0.4079 MGGNTNSPCASCKLLRRRCAKDCIFSPYFPSNDPQKFAIVHKVFGASNVSKMLQELPIQQRSDAVSSLVYEAHARVKDPVYGCVGAISYLQNQVSDLQMQLAVAQAEILCLQMQHEPVMQNPDIALDHKSSYLLQNDLPQYLNFPSSSNRN* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0986 151 Pfam Lateral organ boundaries (LOB) domain 8 105 IPR004883 -
Tpr7g0986 151 PANTHER LOB DOMAIN-CONTAINING PROTEIN 12-LIKE 4 146 - -
Tpr7g0986 151 Coils Coil 87 107 - -
Tpr7g0986 151 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 146 - -
Tpr7g0986 151 ProSiteProfiles LOB domain profile. 7 108 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0986 Tpr-Chr7 9199094 9200465 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0986 1 133 AS2 family AT2G30130 77.372 5.44e-74 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Tpr7g0986 LOB 1e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0986 - - gmx:121173085 252.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0986 7 9199094 9200465 Tpr4g2352 4 24898864 24900539 ECH
Tpr7g0986 7 9199094 9200465 Tpr7g0986 7 9199094 9200465 ECH
Tpr7g0986 7 9199094 9200465 Tpr4g2352 4 24898864 24900539 PCT