Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0980 ATGAGAAAGAGGAAATTCAGCTGCTTTAAGGATCATAGAAGAGTTATGTGGCTTGTGATGTTTTGTTTTTTGTTACAGAGTTTTGGTTTGTGCTGTTCTTTGAATGATGAAGGTAAAGCACTTTTGAAGTTCAAGCAAGGAATTTTGAGTGATCCTTTTGATGCTTTGTCAAATTGGGTTGATGATGAATTTGGTGTTGACCCTTGTAATTGGTTTGGAGTTGAATGTTCAGATGGAAGAGTTGTGGTATTGACGTTGAAAGACCTTTGTCTTGAAGGAAATCTGGCGCATGAGCTTGGGAGCCTTGTTCACATAAAGTCGATAGTTTTGCGGAATAATTCTTTTCACGGAATCATTCCCGAAGGAATTGTACGCTTGAAGGAATTGGAGGTTTTGGATTTGGGATACAACAACTTCAGCGGACCATTACCTAAAGATATTGGGAGTAATATCTCATTATCAATCCTTTTGCTGGACAACAATGATCTTCTTTGTGGTTTCTCGCATGAAGTTAGTGAATTGGTGATGATTTCTGAATCTCAAGTAGATGAAAACCAGCTAATTAGTGGCGGAAAATTGCCAGGTTGTACAGGAAGATCTACCAAATGGCACAATCGCAAAAGTAAAAAAGGTCTTCGAAGGCTACTGCAATCCGGTTCTCTTCCTCCTCCTAACCGGGTAGCTGATCTTCCTCCTCCTTCTCCTTCTCCATCTCCATCCCCATCCCCATCTCCTTCACCTTCCCCGTCTGCCTCAAAAACACCACCAATAGTGCCGAAGCCGGCTTCCCCCAGTCGAAATGATTCTGATTCTCCTTCTGCCTTGCCTGCACCACAATTGAAAAAGACCTCATCAAAGAATCACATTCCTATTGTGGCTGGAATTGTGGGTGGTGCTGTATTTATTCTCATTTCAATCATTGTCGTATATCTCTTCAAAACCAACAAGGTAGCGACCGTTAAACCATGGGCTACAGGATTAAGTGGACAGCTTCAGAAGGCATTTGTGACAGGTGTGCCGAAGCTAAAAAGATCAGAACTTGTAGCGGCATGCGAAGATTTTAGTAATGTAATTGGTACTTCACCCATTGGTCAAGTGTTCAAAGGGACTCTATCCAGCGGTGTCGAAATAGCTGTGGCCTCTGTTACCACGACATCATTGAAAGATTGGTCAAAGACTTCAGAAGTCCAATTTCGTAAGAAGATAGATACATTATCAAAGATGAACCACAAGAATTTCGTAAATCTTATTGGATATTGCGAAGAAGACGAGCCTTTCACCAGAATGGTGGTTTTTGAATATGCCCCAAATGGAACACTCTTTGAGCATTTACACATAAAAGAAGCTGAGCATTTGGATTGGGGAACAAGACTTAGAGTTGCAATTGGCACGGCTTACTGCCTGCAACATATGCACCAGTTGGATCCTCCTTTCGCCCACAGCGACCTAAATTCTTCATCTGTCCAACTCACTGACGACTACGCTGCCAAAATCTCGGACTTGAGTTTCTTGAGCGAAATAACTTCAGATGATACAAAAGCTGCTGCTAAGAAACACAACGAGCCGACATTAGCAAGTAACCTTTACAGCTTCGGCATTATATTACTAGAAATTGTAACAGGCCGTGTTCCTTATTCGATGGATAAAGATGGCACACTTGAAGAGTGGGCTTCACGCTATCTACAAGGGAACCAGCCTCTCAAGGAAATAGTAGATCCAACACTAGCATCCTTCCAAGAAGAACAATTAGTACAAATCGGTGCATTGATTAAATCTTGTACCAATGCTGATCAAGAACAAAGACCAACAATAAAACAAGTTTGTGAGAGATTAAGAGAGATAACAAAAATAAGTCCCGAAGCAGCTGTTCCTAAACTTTCACCACTTTGGTGGGCAGAACTCGAGATTGCTTCTTTTGATGCCAGCTGA 1929 0.4173 MRKRKFSCFKDHRRVMWLVMFCFLLQSFGLCCSLNDEGKALLKFKQGILSDPFDALSNWVDDEFGVDPCNWFGVECSDGRVVVLTLKDLCLEGNLAHELGSLVHIKSIVLRNNSFHGIIPEGIVRLKELEVLDLGYNNFSGPLPKDIGSNISLSILLLDNNDLLCGFSHEVSELVMISESQVDENQLISGGKLPGCTGRSTKWHNRKSKKGLRRLLQSGSLPPPNRVADLPPPSPSPSPSPSPSPSPSPSASKTPPIVPKPASPSRNDSDSPSALPAPQLKKTSSKNHIPIVAGIVGGAVFILISIIVVYLFKTNKVATVKPWATGLSGQLQKAFVTGVPKLKRSELVAACEDFSNVIGTSPIGQVFKGTLSSGVEIAVASVTTTSLKDWSKTSEVQFRKKIDTLSKMNHKNFVNLIGYCEEDEPFTRMVVFEYAPNGTLFEHLHIKEAEHLDWGTRLRVAIGTAYCLQHMHQLDPPFAHSDLNSSSVQLTDDYAAKISDLSFLSEITSDDTKAAAKKHNEPTLASNLYSFGIILLEIVTGRVPYSMDKDGTLEEWASRYLQGNQPLKEIVDPTLASFQEEQLVQIGALIKSCTNADQEQRPTIKQVCERLREITKISPEAAVPKLSPLWWAELEIASFDAS* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0980 642 Pfam Leucine rich repeat 104 163 IPR001611 GO:0005515
Tpr7g0980 642 Gene3D Transferase(Phosphotransferase) domain 1 435 623 - -
Tpr7g0980 642 MobiDBLite consensus disorder prediction 225 262 - -
Tpr7g0980 642 ProSiteProfiles Protein kinase domain profile. 352 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g0980 642 MobiDBLite consensus disorder prediction 264 283 - -
Tpr7g0980 642 MobiDBLite consensus disorder prediction 188 283 - -
Tpr7g0980 642 Gene3D Ribonuclease Inhibitor 33 211 IPR032675 -
Tpr7g0980 642 SUPERFAMILY Protein kinase-like (PK-like) 336 611 IPR011009 -
Tpr7g0980 642 SUPERFAMILY L domain-like 32 174 - -
Tpr7g0980 642 Pfam Leucine rich repeat N-terminal domain 35 77 IPR013210 -
Tpr7g0980 642 Pfam Protein tyrosine and serine/threonine kinase 355 611 IPR001245 GO:0004672|GO:0006468
Tpr7g0980 642 PANTHER PROTEIN MALE DISCOVERER 2 3 642 - -
Tpr7g0980 642 PANTHER BNAA09G55080D PROTEIN 3 642 - -
Tpr7g0980 642 Gene3D Phosphorylase Kinase; domain 1 324 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0980 Tpr-Chr7 9075635 9079459 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0980 18 615 Receptor kinase-like Gene Family AT1G66830 27.247 5.94e-51 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Tpr7g0980 PK_Tyr_Ser-Thr 8.3e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0980 - - gmx:100784541 899.427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0980 7 9075635 9079459 Tpr7g0980 7 9075635 9079459 ECH
Tpr7g0980 7 9075635 9079459 Tpr4g2363 4 25043491 25047399 PCT