Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0975 ATGAAAGGCATGAAGGGTTATGAGCCACGTTCAAGCTCATCTTGTGCAGCGTGCAAGTTACTCAAAAGAAGATGCATACCCAATTGCATATTTGCACCATACTTTCATTCTAACGAGTGCAAGAAATTTGCCAAGGTTCACAAAGTATTTGGGGCAAGCAATGTTAGCAAGATACTCATTGAAGTGCCAGAAAAACAGAGAGAAGACACTGTGAATTCTTTAGCTTATGAAGCAGAGGCAAGGCTTAGAGACCCAGTTTATGGATGCATTGGTTCCATAGCTCTGTTGCAAAGGAAAATGATGGAACTTCAACATGATTTGGCTATTGCTAAGGACCGTCTTGCTCGTTGTCGTGCTGTTGCTGCTGCTACAACTGTCGCAACAACTCCTTTTGTTGATAGTTTGCATTCTCATGTTAGTTTGCCTCCATTTCCTGAGTTTTACACTTCTAGTGATCTCAATGATATCTTCTGCCATGGCTCTTCTTCGCAATTATCGGGTCAAAATGAAACGGTGGATGATTTCAATCAAATTCCATATATATTTTGA 549 0.4062 MKGMKGYEPRSSSSCAACKLLKRRCIPNCIFAPYFHSNECKKFAKVHKVFGASNVSKILIEVPEKQREDTVNSLAYEAEARLRDPVYGCIGSIALLQRKMMELQHDLAIAKDRLARCRAVAAATTVATTPFVDSLHSHVSLPPFPEFYTSSDLNDIFCHGSSSQLSGQNETVDDFNQIPYIF* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0975 182 Coils Coil 93 113 - -
Tpr7g0975 182 PANTHER LOB DOMAIN-CONTAINING PROTEIN 21 4 177 - -
Tpr7g0975 182 ProSiteProfiles LOB domain profile. 13 114 IPR004883 -
Tpr7g0975 182 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 177 - -
Tpr7g0975 182 Pfam Lateral organ boundaries (LOB) domain 14 111 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0975 Tpr-Chr7 9034224 9035478 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0975 4 181 AS2 family AT3G11090 55.618 5.37e-63 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Tpr7g0975 LOB 1.5e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0975 - - gmx:100305534 296.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0975 7 9034224 9035478 Tpr7g0975 7 9034224 9035478 ECH