Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0973 ATGTCAAGCCCTAATTCCCGATCATTAAACTGGCACTACACAGAGCTAGATGACAGAGACCTTGAAATCAGAGGCAGAACACTCTTCTTCATAATCGTACTCTTCTCTATTTTCCTTCTCGTTATCGTTCTTTTCTTCTACACTCGCTGGGTTTGCCATTACCATTCTCACATAACAACCACAACTCTCTCCGCCTCAATTCACGCGCCGCCACCTGCACAACCGCAAGGACTCGACCCTGTTTTGATAAAGAAACTGCCGATTATTCTTCATCAAGCTCCAACTGATCCAGAAAACGGCGCGTGGGAAGACACGGAGTGCTGTATTTGTCTTGGAGAGTTCAGAGACGGTGAGAAAGTGAAGGTTTTACCTGGGTGTCAACATTATTTTCATTGTGATTGTGTTGATAAGTGGTTAACTTGTCAATCTAGTTGTCCACTTTGTAGAGGTTCTTTGAAAATTGAATCTTCTTTTCCTCAGATTTTGATTCAGGAACCACCCATTAGAATTGATATTCAATTCTAG 525 0.4229 MSSPNSRSLNWHYTELDDRDLEIRGRTLFFIIVLFSIFLLVIVLFFYTRWVCHYHSHITTTTLSASIHAPPPAQPQGLDPVLIKKLPIILHQAPTDPENGAWEDTECCICLGEFRDGEKVKVLPGCQHYFHCDCVDKWLTCQSSCPLCRGSLKIESSFPQILIQEPPIRIDIQF* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0973 174 ProSiteProfiles Zinc finger RING-type profile. 107 149 IPR001841 -
Tpr7g0973 174 PANTHER RING-H2 FINGER PROTEIN ATL66 2 164 - -
Tpr7g0973 174 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 2 164 IPR044675 -
Tpr7g0973 174 SMART ring_2 107 148 IPR001841 -
Tpr7g0973 174 Pfam Ring finger domain 106 149 IPR001841 -
Tpr7g0973 174 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 68 154 IPR013083 -
Tpr7g0973 174 SUPERFAMILY RING/U-box 101 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0973 Tpr-Chr7 8992004 8992742 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0973 2 157 C3H Transcription Factor Family AT3G11110 41.463 2.27e-34 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0973 - - gmx:100794927 275.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0973 7 8992004 8992742 Tpr4g2369 4 25137695 25138505 PCT