Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0972 ATGGAAAACTACAACAATGATTCTTCTGAGTGGCAGCAACAACAGCAGCAACATAAGCATTGGTCTCAATACAGTTGTGATGATCATTCACAGTTTCCAACACAAATTCTTCCTCATAATGTTTCTGACTCTTCTTCTGGTTCTTTTCAATATAGTGAGTTTCATTCATGGCCTTTACCTATTGAAGAAAGTTTAGAAGATAGAGCTGTAAGTGCTTCTAAGAGTCATAGTCAAGCTGAGAAAAGACGCAGAGATAGGATTAATACTCAACTTGCTAATCTTAGAAAACTTATTCCTAAGTCTGATAAGATGGACAAGGCAGCTTTACTAGGGAGTGTGATAGATCAAGTAAAAGATCTAAAGCGAAAAGCAATGGATGTTAGCAAAGTCATAACAGTTCCAACTGAAATTGATGAAGTATCAATAGACTACAACCATGTTGAAGATGAAACCAACAATAACAAACTAAACAAATTCAAAAACAATATCATCATCAAAGCTTCTGTTTGTTGCGACGATCGACCGGAACTTTTCTCCGAATTAATCCAAGTCCTCAAAGGTTTAAGACTCACAACAGTTAAAGCTGACATAGCAAGTGTTGGTGGAAGAATCAAAAGTATATTAATACTTTGTTCTAAGGATAGTGAAGAAAATGTTTGCATTAATACTCTTAAACAGTCCCTTAAATCAGCTGTGACAAAAATTGCTTCATCATCAATGGTATCTAATTGTCCTACTAGAAGTAAGAGGCAAAGGTTTTTCTTGCCTTCTCATTTTGTATAG 783 0.3512 MENYNNDSSEWQQQQQQHKHWSQYSCDDHSQFPTQILPHNVSDSSSGSFQYSEFHSWPLPIEESLEDRAVSASKSHSQAEKRRRDRINTQLANLRKLIPKSDKMDKAALLGSVIDQVKDLKRKAMDVSKVITVPTEIDEVSIDYNHVEDETNNNKLNKFKNNIIIKASVCCDDRPELFSELIQVLKGLRLTTVKADIASVGGRIKSILILCSKDSEENVCINTLKQSLKSAVTKIASSSMVSNCPTRSKRQRFFLPSHFV* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0972 260 CDD ACT_UUR-ACR-like 168 203 - -
Tpr7g0972 260 PANTHER TRANSCRIPTION FACTOR BHLH51 31 259 - -
Tpr7g0972 260 SMART finulus 77 126 IPR011598 GO:0046983
Tpr7g0972 260 MobiDBLite consensus disorder prediction 1 26 - -
Tpr7g0972 260 PANTHER TRANSCRIPTION FACTOR BHLH30 31 259 IPR045847 GO:0003700|GO:0006355
Tpr7g0972 260 Gene3D - 66 129 IPR036638 GO:0046983
Tpr7g0972 260 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 71 120 IPR011598 GO:0046983
Tpr7g0972 260 CDD bHLH_AtAIG1_like 66 143 - -
Tpr7g0972 260 Pfam Helix-loop-helix DNA-binding domain 74 120 IPR011598 GO:0046983
Tpr7g0972 260 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 73 124 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0972 Tpr-Chr7 8966941 8968783 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0972 67 259 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G40200 50.746 2.78e-52 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Tpr7g0972 HLH 1.1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0972 - - gmx:100799687 366.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0972 7 8966941 8968783 Tpr7g0972 7 8966941 8968783 ECH