Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0961 ATGGAAAACAAGTTCCAAACCTCAGTTTTACTTGAATTATCAGCAACAGATGATATTCAAGCATTCAAAAGGGAAGTGGAAGAAAAGGGTTGTGATGTAAATGAAGCAGGATTTTGGTATTGTAGAAAATTAGGATCTAAGAAGATGTGTTATGAAAAGAGAACACCCCTTATGGTTGCTTCTTTGTTTGGAAGCAAAAGGGTTGTCAAATATATCATTCAATCAAACATGGTTGATGTTAGCATGCCAATTGGTTGTGAAAATGTCACCGCGTTACATTGTGCTGTTTCCGGTGGCTCTGAATCCACTCTTGAGATTGTTAAGCTCTTGGTTGATGCTGGAGCTGATACTGATTGTCTTGATGAGATAATTAAGCAGAAATTATTGGTGGCTAATTCGAAAGAATTATTAGGAGGTGAGAAGAAAGAATATGCTGTTGATATATCATTGCCTGATATAAATAGCGGTGCTTTCGGAACAGATGAGTTTAGAATGTATAGTTTCAAGGTGAAGACTTGTTCAAGGGGTTACTCTCATGATTGGACTGTGTGTCCATTTGTTCATCCAGGGGAGAATGCTAGAAGGAGAGATCCAAGGAAGTATCCTTATAGTTGTGTTCCATGCCCCGAGTTTCGCAAAGCGGCATGCCAGAAGAAAGATGCATGTGAGTATTCACATGGTGTCTTCGAATCTTTACTTCATCCTTCACAATACAGAACAAGGCTTTGTAAAGATGAGCTTAAGTGTTCTAGGAAAGTGTGTTTCTTTGCACATAGACCTGAAGAGTTGCGCCCGTTGTATGCTTCTACCGGTTCAGCAATGCCTTCACAAGAATCCTTACCGGTTTCAAATGTTTCAACACCAGTTATGTCTCCCTTGGAAGCTGGTTCGTCTCTTAAGAGTGGAAACTTGTGGCAGAATAAAATCAATCAATCTCCACCTTCATTGCAACTTCCACGTAGCCACCTGCAGAAAAATACTTCGAGTGCAAAGGATTTGTATCAGGAAATGGCACTTCTTGATATCGAAAGAGCTATTAGTCAACAGCAGCAGCAGTTGATTGAAGAAATTCTTTCAATGCAACCTTCAACTCCTACTCAATTTCAATCGATGAGTAGGCTTCAGATGAACCAAAACAGGAACAATATTCAAGCAAGTTATCCATTCAACAACATTGTTTCCTCTCCTATGAGAAAATCATCACCATCTGGATTTAACTCATCAGCTGCTGTGGCTACAGCAGTGATGAACTCAAGATCATCAGCCTTTGCAACACGAAGCCAAAGTTTTATGGATCGCGGTGCGGCAAGACACCATCTTGGTGCTTCCAAACCCAATGGCAGGATGAACTCCGAACAATGGGATGATGTGAACAAGTTCCAAAAATCTGTTTCTTTTGGGTCGAGATATAATGGGGTAGCTGCCCCACCCTTGGCGCGCCTGCCAGAATATGCTGAACCGGATATCTCGTGGGTTCATTCGCTTGTTAAAGACGTTTCTTCTGAAAGTTCTGAGATGTTTGGTTCTAAGAAGCAACATTATGATCTCTATAAACAAATGTTATCACCATGGGCAGAGCAGATTGTAGCATAA 1593 0.408 MENKFQTSVLLELSATDDIQAFKREVEEKGCDVNEAGFWYCRKLGSKKMCYEKRTPLMVASLFGSKRVVKYIIQSNMVDVSMPIGCENVTALHCAVSGGSESTLEIVKLLVDAGADTDCLDEIIKQKLLVANSKELLGGEKKEYAVDISLPDINSGAFGTDEFRMYSFKVKTCSRGYSHDWTVCPFVHPGENARRRDPRKYPYSCVPCPEFRKAACQKKDACEYSHGVFESLLHPSQYRTRLCKDELKCSRKVCFFAHRPEELRPLYASTGSAMPSQESLPVSNVSTPVMSPLEAGSSLKSGNLWQNKINQSPPSLQLPRSHLQKNTSSAKDLYQEMALLDIERAISQQQQQLIEEILSMQPSTPTQFQSMSRLQMNQNRNNIQASYPFNNIVSSPMRKSSPSGFNSSAAVATAVMNSRSSAFATRSQSFMDRGAARHHLGASKPNGRMNSEQWDDVNKFQKSVSFGSRYNGVAAPPLARLPEYAEPDISWVHSLVKDVSSESSEMFGSKKQHYDLYKQMLSPWAEQIVA* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0961 530 Gene3D - 204 265 - -
Tpr7g0961 530 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 29 359 528 - -
Tpr7g0961 530 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 29 5 361 - -
Tpr7g0961 530 SMART ANK_2a 52 82 IPR002110 GO:0005515
Tpr7g0961 530 SMART ANK_2a 87 119 IPR002110 GO:0005515
Tpr7g0961 530 Gene3D - 1 142 IPR036770 -
Tpr7g0961 530 Pfam Ankyrin repeats (3 copies) 30 118 IPR002110 GO:0005515
Tpr7g0961 530 PANTHER UNKEMPT FAMILY MEMBER 5 361 IPR045234 -
Tpr7g0961 530 PANTHER UNKEMPT FAMILY MEMBER 359 528 IPR045234 -
Tpr7g0961 530 SUPERFAMILY Ankyrin repeat 6 124 IPR036770 -
Tpr7g0961 530 ProSiteProfiles Zinc finger C3H1-type profile. 202 229 IPR000571 GO:0046872
Tpr7g0961 530 ProSiteProfiles Ankyrin repeat profile. 87 122 IPR002110 GO:0005515
Tpr7g0961 530 ProSiteProfiles Ankyrin repeat region circular profile. 87 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0961 Tpr-Chr7 8887448 8889356 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0961 8 501 C2H2 Transcription Factor Family AT5G12850 34.646 1.25e-103 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0961 - - mtr:MTR_3g070880 801.586