Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0954 ATGATGGCATCATCAAAACACCGCCCACCACCGCCACAACAACTCTCCGACTCAGATTCCGACGGTGGCTCCTCCACTTCTACACTCCTCCGTCACTCAGACCTCTCCGAATCTATATTCAAATCCTACTTCAATTTCTCCGGCCACTCCTCAACCAATGCCACCTCCGCCGATCTCTCCAAGATCCAATCATTCCTCACTTCCTCCTCCTCCGGCGCTCTTTCCTGCCTCATTTGTCTCGAACGCATCAAACCCTCCGATCCCACATGGTCCTGCACCTCCCTATGCTTCGCTGTATTCCATCTCTTCTGCATTCAAAGCTGGTCCCGTCAAGCTTCCGATCTCGCCGCCGCACGCGCCGTCACTCGTCTCTCCATTTCACCTGATCAAGCCTCTGATACATCTCTCTGGAATTGCCCCAAATGTAGAGTTGAATATCCCAAAACCTTAATCCCTAAAACCTATCTATGTTTCTGTGGAAAATTGGAGAATCCTCCAAGTGATGATCCTTGGGTTTTACCTCATTCTTGTGGTGATGTTTGTGGTAGATCTTTGAAGAACAATTGTGGGCACCATTGTTTGCTTTTATGCCATCCTGGACCATGTCCATCTTGCCCACAACTTGTTAAAGTTCGTTGCTTTTGTGGGTCTCATCAAGATGTTCGAAGATGTGGGTTTAAAGAGTTTTCTTGTGAAGCTCCTTGTTCAAAGTTATTGGATTGTGGTGTGCATAAGTGTGTTGAGATTTGCCACCTTGGCGCATGTCCGCCTTGTCGGGCGCGTGGTGTTTATAGGTGTCAATGTGGGAAGGTGAAAGTGGAGAGGGAGTGTTGTGATCGTGTTTTTCGATGTGATGATCCCTGTGAGAAGAAGCTTAGTTGTGGGAAGCATGTTTGTGAGAGAGGGTGTCATTCTGGTGAATGTGGCGAGTGTCCTTTACAAGGGAAGAGAACATGTCCTTGTGGAAAAAGGGTATATGAAGGAATGCCTTGTGATGCTCCTATGCAGGTTTGTGGAGCTACTTGTGATAAAATGTTATCCTGTGGGTATCATAGGTGTCATGAACGATGCCACCGTGGACAATGTATCCAGACTTGTAGGATTGTTGTGAAGAAATGTTGTCGCTGTGGTAGCCTCAAGAAAGATGTACCTTGCTATCAAGATTTGGCATGTGAGAGGAAGTGTCAGACGTTGCGCGACTGTGGTAGGCATCCTTGTAAACGCCGCTGCTGTGATGGAGATTGCCCTCCGTGCTCAGAGATATGTGGTAAGAGGCTTCGCTGTAGGAACCATAAATGCCAATCTCCATGCCATAGAGGTCCCTGTGCTCCTTGTCCTATTATGGTGACAATTTCGTGTGCATGTGGGGAGACACATTTTGAGGTTCCATGTGGTACAGAAATGGATCAAAAACCACCTAAATGCCGTAAACAATGTCCTATTAAGCCTTTGTGCCGACATGCATTAATCTGCAAGCCACACAAATGCCATTATGGAGCCTGCCCTCCTTGTCGCCTACCTTGTGCAGAAGAGTACCAATGTGGCCATGCATGCAAATTAAGGTGTCATGGTGCAAGGCCTCCTCCAAATCTAGAATTTACTCTTAAACCAAAGAAAAAGAAGAATACACAACAAAGTGAAATTGTTCCCGGCACTCAATGCCCTCCTTGCCCGGAACTAGAATGGAGATCATGTGTAGGGCAGCACATGGGAGCAGAGCGAATGATGGTCTGCTCTAATAAATCACAGTTCTCCTGTGAAAATTTATGTGGTAATCCTCTACCGTGTGGTAATCATTATTGTACTAAAACCTGTCATCCCTTGGAGAACCAGTCTTCCACGAACCAGTCAATAAGAAGTGAGGCTTGTGAAGATTGTTTGCTTTCTTGCCAAAAGGAAAGAAAGCCTAAGTGTCAACATCACTGTCCTCGGCGATGCCATCCTGGAGATTGCCCCCCATGCAAGGTGTTAGTTAAACGGTCATGTCATTGTGGTGCAATGGTCCATGCTTTTGAGTGTATTTATTACAACAGCCTTTCTGCAAAGGATCAAGAGACTGCCCGGTCATGTGGTGGACCATGTCATAGAAAGATGCCAAATTGTACGCATCTATGCCCAGAGACATGTCATCCTGGTGAATGCCCAAATCCTGATAAATGCGGTAAAAAGGTCACTGTTCGGTGCAAATGCCAAACACTGAAAAAGGAGTGGCTTTGTCAAGATGTTCAAGCAGCACATAATCGTGCCGGTTGCAATCCAAGTGATATACCAAAAAATCAATTTGGAGTTGGACTTATTCCTTGCAATTCGGACTGTAAGAGTAAAGTGCAGGTTGTTGAGTCAGAACTGCAATTACGGAAATCTAGAGTTACCGAGGTAAAGGAGCCAGATAATGAAAAATCAGTTCCAAAGCGACGAAAAAGGCGGGAGCGGGTAGTAGAATCCAATGAACCGACAATACTACAGAAAATAATTTCCAGAACAAAGCAGGTTCTTCTATTTATCTTTTTCTTATTCATACTTGTTGCCGCTACTCATTATGGATACAAGGGACTACTACAGCTCAATGATTGGATGAATAAAGTTGACGAACAAAGACATAGATCTTCACGAATCAGATGA 2622 0.4539 MMASSKHRPPPPQQLSDSDSDGGSSTSTLLRHSDLSESIFKSYFNFSGHSSTNATSADLSKIQSFLTSSSSGALSCLICLERIKPSDPTWSCTSLCFAVFHLFCIQSWSRQASDLAAARAVTRLSISPDQASDTSLWNCPKCRVEYPKTLIPKTYLCFCGKLENPPSDDPWVLPHSCGDVCGRSLKNNCGHHCLLLCHPGPCPSCPQLVKVRCFCGSHQDVRRCGFKEFSCEAPCSKLLDCGVHKCVEICHLGACPPCRARGVYRCQCGKVKVERECCDRVFRCDDPCEKKLSCGKHVCERGCHSGECGECPLQGKRTCPCGKRVYEGMPCDAPMQVCGATCDKMLSCGYHRCHERCHRGQCIQTCRIVVKKCCRCGSLKKDVPCYQDLACERKCQTLRDCGRHPCKRRCCDGDCPPCSEICGKRLRCRNHKCQSPCHRGPCAPCPIMVTISCACGETHFEVPCGTEMDQKPPKCRKQCPIKPLCRHALICKPHKCHYGACPPCRLPCAEEYQCGHACKLRCHGARPPPNLEFTLKPKKKKNTQQSEIVPGTQCPPCPELEWRSCVGQHMGAERMMVCSNKSQFSCENLCGNPLPCGNHYCTKTCHPLENQSSTNQSIRSEACEDCLLSCQKERKPKCQHHCPRRCHPGDCPPCKVLVKRSCHCGAMVHAFECIYYNSLSAKDQETARSCGGPCHRKMPNCTHLCPETCHPGECPNPDKCGKKVTVRCKCQTLKKEWLCQDVQAAHNRAGCNPSDIPKNQFGVGLIPCNSDCKSKVQVVESELQLRKSRVTEVKEPDNEKSVPKRRKRRERVVESNEPTILQKIISRTKQVLLFIFFLFILVAATHYGYKGLLQLNDWMNKVDEQRHRSSRIR* 874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0954 873 CDD NF-X1-zinc-finger 638 667 - -
Tpr7g0954 873 CDD NF-X1-zinc-finger 231 279 - -
Tpr7g0954 873 PANTHER NF-X1-TYPE ZINC FINGER PROTEIN NFXL1 13 870 - -
Tpr7g0954 873 MobiDBLite consensus disorder prediction 790 810 - -
Tpr7g0954 873 CDD NF-X1-zinc-finger 391 439 - -
Tpr7g0954 873 MobiDBLite consensus disorder prediction 9 27 - -
Tpr7g0954 873 CDD NF-X1-zinc-finger 418 466 - -
Tpr7g0954 873 CDD NF-X1-zinc-finger 177 225 - -
Tpr7g0954 873 CDD NF-X1-zinc-finger 338 387 - -
Tpr7g0954 873 MobiDBLite consensus disorder prediction 1 27 - -
Tpr7g0954 873 Pfam NF-X1 type zinc finger 294 312 IPR000967 GO:0005634|GO:0008270
Tpr7g0954 873 Pfam NF-X1 type zinc finger 189 206 IPR000967 GO:0005634|GO:0008270
Tpr7g0954 873 Pfam NF-X1 type zinc finger 241 259 IPR000967 GO:0005634|GO:0008270
Tpr7g0954 873 Pfam NF-X1 type zinc finger 401 419 IPR000967 GO:0005634|GO:0008270
Tpr7g0954 873 Pfam NF-X1 type zinc finger 348 367 IPR000967 GO:0005634|GO:0008270
Tpr7g0954 873 Pfam NF-X1 type zinc finger 639 655 IPR000967 GO:0005634|GO:0008270
Tpr7g0954 873 Pfam NF-X1 type zinc finger 495 505 IPR000967 GO:0005634|GO:0008270
Tpr7g0954 873 Pfam NF-X1 type zinc finger 422 446 IPR000967 GO:0005634|GO:0008270
Tpr7g0954 873 Pfam NF-X1 type zinc finger 596 607 IPR000967 GO:0005634|GO:0008270
Tpr7g0954 873 CDD NF-X1-zinc-finger 284 331 - -
Tpr7g0954 873 SMART znfxneu3 514 559 IPR000967 GO:0005634|GO:0008270
Tpr7g0954 873 SMART znfxneu3 596 628 IPR000967 GO:0005634|GO:0008270
Tpr7g0954 873 SMART znfxneu3 268 290 IPR000967 GO:0005634|GO:0008270
Tpr7g0954 873 SMART znfxneu3 401 420 IPR000967 GO:0005634|GO:0008270
Tpr7g0954 873 SMART znfxneu3 348 368 IPR000967 GO:0005634|GO:0008270
Tpr7g0954 873 SMART znfxneu3 241 260 IPR000967 GO:0005634|GO:0008270
Tpr7g0954 873 SMART znfxneu3 428 447 IPR000967 GO:0005634|GO:0008270
Tpr7g0954 873 SMART znfxneu3 701 730 IPR000967 GO:0005634|GO:0008270
Tpr7g0954 873 SMART znfxneu3 491 506 IPR000967 GO:0005634|GO:0008270
Tpr7g0954 873 SMART znfxneu3 638 656 IPR000967 GO:0005634|GO:0008270
Tpr7g0954 873 SMART znfxneu3 189 207 IPR000967 GO:0005634|GO:0008270
Tpr7g0954 873 SMART znfxneu3 215 237 IPR000967 GO:0005634|GO:0008270
Tpr7g0954 873 SMART znfxneu3 294 313 IPR000967 GO:0005634|GO:0008270
Tpr7g0954 873 PANTHER NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 NFX1 13 870 IPR034078 GO:0003700
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-X1 Tpr7g0954 zf-NF-X1 0.00029 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0954 K15683 - gmx:100799540 1557.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0954 7 8789795 8797524 Tpr7g0954 7 8789795 8797524 ECH