Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0944 ATGGCAAATTACTATGATATTGATGACATTTTGGTGGAGGAAGAGATTGTGTCAGTTATATTTCAGAAGGCAGCATCTGGAGTGGGAATAGATCCCAGTTCTGAAACAGACTTTATTGAAACAGGTTCAAAAGTTGAACTGCCTTTTTGGCTTGCTCACGAGTTACAGTTGAGACAAGCAGTATCAGTCAATGTTCCCCCTTGTTTCAATCAAAAAACAAGACTAGAGATCCAAGCTGATTGTGCATGTGTAGATCTGAGGTCCAGATGTCCATACTTTTATGAATTTGGTTGCAAGATAGCACCAATAGTTGGCGATAGAACCATCGGGTTTCTGTTGTTGTCGGCATTTAAGAATAGGTACAGGGAGGTCCTCACAAAGGCGCACACTGCAGCAATTACTGCTGGTTCCAAATTTTGGACTATTCTAACAAATGAAGAGATCAATTTGTATGAGACAGCTCAATCCGCAATGGCATCCTTCAAAAAGTGGCGAATGGGTGGGGCTAGATTTCAGATAGCATCTATTCTGGGAAGAAAGAGAAAACCAACTGAGTAG 558 0.4122 MANYYDIDDILVEEEIVSVIFQKAASGVGIDPSSETDFIETGSKVELPFWLAHELQLRQAVSVNVPPCFNQKTRLEIQADCACVDLRSRCPYFYEFGCKIAPIVGDRTIGFLLLSAFKNRYREVLTKAHTAAITAGSKFWTILTNEEINLYETAQSAMASFKKWRMGGARFQIASILGRKRKPTE* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0944 185 SUPERFAMILY GINS helical bundle-like 65 166 IPR036224 -
Tpr7g0944 185 CDD GINS_A_psf3 61 167 - -
Tpr7g0944 185 Pfam GINS complex protein 45 147 IPR021151 -
Tpr7g0944 185 SUPERFAMILY PriA/YqbF domain 1 66 - -
Tpr7g0944 185 Gene3D - 2 166 IPR038437 -
Tpr7g0944 185 PANTHER UNCHARACTERIZED 1 184 IPR010492 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0944 1 182 Core DNA Replication Machinery Family AT3G55490 70.330 1.03e-96 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0944 K10734 - gmx:100799874 320.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0944 7 8682595 8687776 Tpr7g0944 7 8682595 8687776 ECH